Protein

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Genbank accession
XRL29493.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANKISTVRTYPLNGAVNFTITFEYLARKFVQVTLIGKDRKELVLNQDYRFTSKTQITTSRTWTAADGYQMIEIRRFTSATDRLVDFADGSILRAYDLNISQIQTLHVAEEARDLTADTIGVNNDGHLDARGRKIVNLAFATNDYDAVPLKQIKERESSAWSAVTKANEHADRSNREANRSRDEANRAQREADRSTQQAGISTAQAVESKKQADRSNSEANRAKGYADSMTASVAEAKKQADRSNSEANRARDEANRAAGEVTKAAAEVAKAAAHVATAKGHADRANTEANRSKSEADRAKTEADKLGNMNDLAGTIESIGSNGKDINFKGGVNGNTILAKNSVHAGVQPNTAFFSDNTLRLRNRDHKERAWDIFVWGNDSGRGNVLEFGTNYGKGYGMYLQFANGDSQDSQLQVNGAIAAKTDIYGRGITANGELITRSQNLKLINSARRHIQFMTADNYTDGYLYKDPGAGAWRLNFGHAANMEYTFASNGHLTSNSGWNIPPDGNLYIKKYGMYIDAWVNKRLSEHAYNKGEVNNLVNGRLTAGQGDGRYVRKNAGWAEVWKGSAGGGVSVGLSQDVRWRTIWIQTQGRWNPVQIGDNGAYYISSMGGWLQFTISNNGRTFRNDADRASVPTRILVQTQ
Physico‐chemical
properties
protein length:642 AA
molecular weight: 70706,18910 Da
isoelectric point:9,42987
aromaticity:0,08255
hydropathy:-0,69688

Domains

Domains [InterPro]
IPR005604
ATT
1–130
IPR005604 Coil Coil Coil G3DSA:2.60.320.30
DC_0778
STR
1–641
DC_0778
XRL29493.1
1 642
Architecture
ATT
STR
ATT 1-130 | STR 131-641 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRL29493.1
1 642
Domain Start End Length (AA) Confidence
N-terminal 1 278 278 0,7490
Central domain 279 486 209 0,4800
C-terminal 487 642 155 0,9343
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-278
Central
279-486
C-terminal
487-642

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage nasanit
[NCBI] 		3411980 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRL29493.1 [NCBI]
Genbank nucleotide accession
PV245933.1 [NCBI]
CDS location
range 37697 -> 39625
strand +
CDS
ATGGCTAACAAAATTTCCACTGTGCGTACTTACCCACTTAATGGTGCCGTGAACTTCACAATCACCTTTGAGTATCTGGCCCGTAAGTTCGTGCAAGTAACCCTAATTGGTAAAGACCGTAAGGAACTGGTTCTCAATCAGGACTACCGCTTTACCTCTAAGACGCAAATCACAACATCTCGTACTTGGACTGCCGCAGATGGCTACCAGATGATTGAGATTCGTCGATTCACTTCAGCTACTGACCGTCTGGTTGACTTTGCTGATGGCTCTATTCTTCGTGCGTATGACCTGAACATCTCACAGATTCAGACGCTGCACGTTGCTGAGGAAGCACGAGACCTCACTGCTGATACTATTGGTGTCAACAACGATGGTCACTTAGATGCCCGTGGTCGTAAGATTGTGAACCTTGCGTTCGCTACCAATGACTATGATGCGGTCCCTCTGAAGCAGATTAAAGAGCGTGAGTCCTCTGCGTGGAGTGCTGTTACTAAGGCAAACGAACATGCTGACCGTTCTAATCGAGAGGCTAATCGTTCTCGTGATGAGGCTAACCGTGCTCAACGTGAAGCTGACCGTTCAACTCAACAGGCAGGTATCTCTACGGCACAAGCGGTTGAGTCCAAGAAGCAAGCTGACCGTTCCAACTCTGAGGCTAACCGTGCTAAAGGTTATGCTGATAGTATGACCGCAAGTGTCGCTGAGGCCAAGAAGCAAGCTGACCGTTCCAACTCTGAGGCCAATCGTGCCCGTGATGAGGCCAATCGTGCTGCCGGAGAAGTGACTAAAGCTGCTGCTGAGGTTGCCAAGGCTGCTGCACATGTGGCTACAGCTAAGGGACATGCTGACCGAGCCAACACTGAGGCCAACCGCTCCAAGAGTGAAGCCGACCGTGCAAAGACCGAGGCCGATAAGTTGGGGAACATGAATGACCTAGCAGGGACCATTGAGAGCATTGGAAGTAATGGTAAGGACATTAACTTCAAGGGAGGCGTTAATGGTAACACAATTCTTGCTAAGAACTCTGTACACGCTGGGGTTCAACCAAACACTGCGTTCTTCAGTGATAACACACTACGTCTTCGCAACCGTGACCACAAGGAACGCGCTTGGGACATCTTTGTTTGGGGTAATGATTCTGGACGGGGCAACGTACTGGAGTTCGGAACTAACTACGGTAAAGGGTATGGGATGTACTTGCAGTTTGCTAATGGTGACTCACAAGATTCCCAACTTCAGGTTAATGGTGCAATTGCAGCTAAGACAGATATTTATGGACGGGGCATCACAGCAAATGGGGAATTAATTACCCGATCACAAAACCTTAAGCTGATTAACTCTGCTCGTCGACATATTCAGTTCATGACTGCCGATAACTACACCGATGGTTATCTCTATAAAGACCCCGGTGCTGGTGCGTGGAGACTTAACTTTGGTCATGCAGCTAACATGGAGTATACGTTTGCTTCAAACGGTCACTTGACATCTAACTCAGGGTGGAACATCCCACCAGATGGTAACCTATATATCAAGAAGTACGGAATGTACATTGATGCTTGGGTCAACAAGCGTCTGTCCGAACATGCCTACAACAAGGGTGAAGTTAACAACTTGGTCAACGGTCGCCTCACTGCTGGTCAAGGTGATGGTCGCTATGTCCGCAAGAACGCTGGGTGGGCTGAGGTCTGGAAAGGCTCTGCTGGTGGTGGTGTCTCTGTAGGTCTCTCTCAAGATGTCCGCTGGAGAACCATCTGGATTCAAACACAAGGTCGTTGGAACCCTGTTCAAATTGGGGACAATGGGGCTTACTATATCTCGTCTATGGGTGGGTGGTTGCAGTTCACCATCTCTAATAACGGTAGGACGTTCCGTAACGATGCAGACAGAGCTTCTGTTCCTACGAGAATCTTGGTTCAAACCCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fcb8b8163e57fc65478ff0bf15b98d9b08bf3f4c7c7a27f27acb520db5c148ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6788
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of Escherichia phage nasanit Imklin,N., Kvederaviciute,K., Aesomnuk,W., Arikit,S., Simoliunas,E. and Nasanit,R. 2022-01-10 — GenBank