Protein

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Genbank accession
AMM43791.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MYSIKTDLGVSGNQTISKDLLVNGNAVITNNLTVGGTINFANATFTQITVTGTANLNNVNSTGTASLNNVQVSGNTILGDSGTDTVTVNGVTTFNANVNAKSNVSIEGNTVVGNASTDTLTVNATSTFAAPATFNDDVTVGASSTDSLIVNSTSDFKNNVTIGENSTDILTVNSTTNLKSNVTVDGNTTLNGNTVIGDASTDTLTVNATSDFKNNVTIGSDSTDILTINSTTNLVGDLNVTGSTNLESLTVDGTSNLNGDLVMGAGTSATFEDVIINGTLGGNFSLANGNFTTLNVTGQSNLNSVVLSGNVTGTTRSATFQTYNVAGQTGLIQFTYNDPARPLDIKSAIEPYKVSSSEFQGQKADIDRITVGDVTFADYGLTAAGKAVIDYLDIKGNSTTGTSRPQLTVAGTSTFTGAVTVGDLNITGAVTGLNFADLNVTGDMTVAGTSDFTNKATFVDLESTGTATFNDVVINGTLTGGFNIKDGNFETLTVSGQSSLSSVVLSGNVTGSAQTATFNTFTVAGNTGVVQFSYNDPARPLDIKSAIEPYKVSSSTFQGQNADLDYITVGDVTFSNPGLTAAGIAKIDYLDIVGNSTTGTSRAQLTVAGKTILNDLEVTGSVSGITFDLTGQDITLNSLTSTTSVDAASVTASGQVSAGTLSVSGGSVLGGNVTVNGQTVTVKDLVVTGTTTGVTAQANVDGLDIVPNSVDVDTTLNVTGATTLTDVTVSGILAGNGGNEVIVSGISTAGGITTTKAGTALDVTNNAHIGGTLTVDGNTSFGGTTGQTTIHNLVVTGTTTGVTAAANVDGLDIEPNSVVATTSVKGATLESTGATTVGTNLTVGGDATVTGDVTVNGTLTPAGGLDLSAADVDVNSLTSAANVTVGGDLAVTGNVTGTLKAANITASGTLDVTGATTLAGLSAGNTAITGTLSTSGLATLASATVTGAATFNGNITSANTTVAIAKSTSITGDLTVSGTLNAGGIDLTGTAINAASLDTTGDVNVGGDLVVAGTFDLSTSNVSAATLTSTGNTTVGADLVLTTGVITGSPKVSGTLNVTGATTLSSLTVPTINGNTTFANNVTVTGTFSPAGGLDLSGADIDANSIDLAAGATVGTTLGVTGNTTIGGTLGVTGLTTLAGVDSGNHGITGTLTVSGASNLADVTIGNTLTVAGNTTLSGNLTVNGTTTTVNDFVADAVKIGTGTGNAGMLLDVFGNTTITGDLDVTGVINAAIDLTSRDISPRNITASGSISAAGSLTAGTSLTAKTAILGDVGSTNNNLQVNGNATYTGNLEVQGLIIGTLDQTTSDVTFKSVTTTEGITSGTTLNVAGASTLAAVSATTLSTSGLATLNSASVTTTLGVTGATTLSTLSTSGLATLASGTVTGALTVGGTTTLNGNTVIGDADTDTLTVNATSTFAGAVTVDDITVTGTLNVDLANLTTTSFKTGTYFVAQHAQETVSTATYTPDGTSNVYNVTVSSNTAIQPITGAAAGGAGSWFIYITQDSTGGRTVTWDSSYKIIGGEVNTSANAVSICQVVYCGIGSVFDVFIAQRP
Physico‐chemical
properties
protein length:1553 AA
molecular weight: 153248,95750 Da
isoelectric point:4,05003
aromaticity:0,03863
hydropathy:0,19942

Domains

Domains [InterPro]
IPR006626
Unmapped
67–90
IPR006626 IPR006626 DC_0092 IPR006626 IPR006626 DC_0062 DC_0092 DC_0931
IPR006626
Unmapped
266–288
IPR006626 DC_0092 IPR006626 DC_0092 IPR006626 IPR006626 IPR006626 IPR058970
IPR006626
Unmapped
1472–1493
IPR006626
AMM43791.1
1 1553
Architecture
STR
STR
RBD
STR 204-702 | STR 738-1208 | RBD 1220-1553
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage vB_PcaM_CBB
[NCBI] 		2772511 Uroviricota > Caudoviricetes > Mimasvirus >
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
c712cc284e7ed59a951b19c99857095be2694cd1496ed218c7ff2ca0c4a7123b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5565
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50