Protein

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Genbank accession
ATW57968.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPSLGKHDELSVTRVHKGQIDEARAKYECHVETSKGVIQFGTDCQRRMNAVLLTLTPGKGDTVEWKMADNSYVTLTFEELRDLINEAQNLAGPKLLSAFQYAQTLKGKLEAGGFVSERDIAPEKWL
Physico‐chemical
properties
protein length:126 AA
molecular weight: 14081,86670 Da
isoelectric point:5,91378
aromaticity:0,07143
hydropathy:-0,44524

Domains

Domains [InterPro]
DC_2197
STR
9–125
DC_2197
IPR025484
STR
23–109
IPR025484
ATW57968.1
1 126
Architecture
STR
STR 9-125 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage nickie
[NCBI] 		2048977 Uroviricota > Caudoviricetes > Nickievirus >
Host Pseudomonas syringae pv. avii
[NCBI] 		663959 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATW57968.1 [NCBI]
Genbank nucleotide accession
MG018927.1 [NCBI]
CDS location
range 28638 -> 29018
strand +
CDS
ATGCCGTCGTTAGGTAAGCATGACGAACTGAGCGTAACGCGGGTTCACAAGGGTCAGATCGACGAAGCGCGCGCCAAGTACGAGTGCCACGTTGAAACCAGCAAGGGCGTTATTCAGTTCGGCACCGACTGTCAGCGCCGGATGAACGCCGTTCTGCTCACGCTCACGCCTGGTAAGGGTGACACCGTCGAATGGAAGATGGCGGACAACAGCTATGTGACCCTGACGTTTGAAGAGCTGCGCGATCTGATCAACGAGGCGCAGAACCTCGCTGGCCCTAAGCTCTTGTCAGCGTTCCAGTACGCTCAGACGCTAAAGGGTAAGCTCGAAGCTGGAGGCTTCGTCTCAGAGCGCGACATTGCGCCCGAGAAGTGGCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5fe3888783b7d4219b57d7f415040e1e703c0915d4b1b44be554dc9369287df7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9186
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50