Protein

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Genbank accession
XLG28252.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MAAIRYGTRIDLQNNQLLNACIHKQNGLPTATAALAGVMRFNTADGRFYVCTGSAWELRATNSDALQGLTPAQLRDRTTHTGFQAASTISDLRTVVGGYPLNEHAAPTGPVAMGSQRLTGLGDGTGASDAVNKGQLDAVLAIANAAAQGIAIKQPVLAVATANVSLATITTIDGVTIPTNGRFLLVGQTDATQNGIYIKNASNAAVRATDADAAGELGPGTQVFVTQGTDNADTAWAIISDAAVTPGTNAQTWAKVPGQSGSSYTFGNGLLNTANTISVKPGIGINVTDGNVNIDTSVVLRKNAQSVPSGQGTLVTISHGLNTSDIVAVQVRDTSGAANTGDLVQCGATVTGVNTIQLEFEVAPVANQYRVAIAG
Physico‐chemical
properties
protein length:375 AA
molecular weight: 38198,18230 Da
isoelectric point:5,51880
aromaticity:0,04267
hydropathy:0,04320

Domains

Domains [InterPro]
DC_1609
STR
3–375
DC_1609
IPR011049
STR
81–139
IPR011049
XLG28252.1
1 375
Architecture
STR
STR 3-375
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLG28252.1
1 375
Domain Start End Length (AA) Confidence
N-terminal 1 293 293 0,9129
Central domain 294 364 72 0,0076
C-terminal 365 375 10 0,9973
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-293
Central
294-364
C-terminal
365-375

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage ScarletRaider
[NCBI] 		3251017 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLG28252.1 [NCBI]
Genbank nucleotide accession
PQ184837 [NCBI]
CDS location
range 86797 -> 87924
strand +
CDS
ATGGCTGCCATTCGGTACGGCACTCGCATCGACCTTCAGAACAACCAGTTGCTGAACGCGTGCATCCACAAGCAGAACGGCCTCCCCACTGCCACAGCAGCATTGGCGGGAGTCATGCGGTTCAACACCGCCGATGGTCGTTTCTACGTGTGCACGGGCAGTGCATGGGAGTTGCGAGCGACCAACTCCGACGCGTTGCAGGGTCTGACCCCGGCGCAACTCCGTGACCGGACCACACACACCGGCTTCCAGGCAGCGAGCACCATCTCCGATCTGCGCACGGTCGTCGGTGGATACCCGCTCAATGAGCACGCTGCACCGACCGGCCCTGTCGCCATGGGCAGCCAGCGTCTCACCGGACTCGGGGACGGTACCGGCGCATCGGACGCGGTGAACAAGGGGCAACTCGATGCCGTACTCGCCATCGCCAATGCCGCCGCACAGGGCATCGCGATCAAGCAGCCGGTCCTCGCCGTCGCAACCGCCAACGTCTCGCTGGCGACCATCACCACCATCGACGGAGTGACGATCCCGACCAATGGTCGCTTCCTCCTCGTCGGCCAGACCGATGCCACGCAGAACGGCATCTACATCAAGAACGCCTCGAACGCCGCAGTGCGTGCCACCGACGCAGATGCAGCCGGTGAACTCGGGCCGGGCACCCAGGTTTTCGTGACTCAGGGAACTGACAACGCCGACACCGCGTGGGCGATCATCAGCGATGCCGCCGTCACTCCGGGAACCAACGCACAGACGTGGGCCAAGGTGCCGGGCCAGAGCGGATCGAGCTACACGTTCGGAAACGGTTTGCTGAACACAGCAAACACCATCTCCGTGAAGCCGGGTATCGGTATCAATGTCACCGACGGCAACGTGAACATCGACACCTCTGTGGTGTTGCGTAAGAACGCGCAATCCGTCCCCTCGGGGCAGGGGACACTGGTCACCATCTCTCACGGTCTCAATACCTCCGACATCGTCGCCGTCCAGGTCCGTGACACCTCGGGTGCCGCCAACACCGGCGACCTCGTGCAGTGCGGTGCAACGGTGACCGGCGTCAACACGATCCAGTTGGAGTTCGAGGTTGCGCCCGTTGCGAACCAGTACCGAGTTGCGATTGCCGGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4f2c929a682342f0a14df053184edc85c5871311d4edefedeb3a7ac2c0e7a023
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8221
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50