Protein

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Genbank accession
QXV80670.1 [GenBank]
Protein name
tail tube protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,61
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLKTLGGSGDLGQAPYIHLINRDENEQYYAVFTGTGIRVFDLAGNEKQVRYPNGSNYIQTAQPRNDLRMVTVADYTFIVNRNVVVQKDPLYINLPNYNPKQDALINVRGGQYGRTLQIMINGGTQASYQIPDGSQPAHVNNTDAQWLAEELARQCRANAPGWTFNVGQGFIHIVAPSGQQIDSLMTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWAETLGWNTEDQVLWNTMPHALVRASDGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTARSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITAHVPNYIPNGVFSICGSGTENFCSVLSNGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSIGSDMYVILRNEFNTFLARISFTKNAIDLRGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRDKITVLEPDGKITVCEQPTGGWNSDPWLRLSGNLEGREVFIGFNIHFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYEDSGAFDIYVENQSSNWKYTMAGARLGSNSLRAGRLNLGTGQYRFPVVGNAKFNTVYIVSDATTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:794 AA
molecular weight: 89092,69030 Da
isoelectric point:5,72348
aromaticity:0,12091
hydropathy:-0,35353

Domains

Domains [InterPro]
IPR058003
TTP
1–794
IPR058003
QXV80670.1
1 794
Architecture
TTP
TTP 1-794
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV80670.1
1 794
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9940
Central domain 141 348 209 0,1800
C-terminal 349 794 445 0,1844
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-348
C-terminal
349-794

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JacobBurckhardt
[NCBI] 		2852037 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teseptimavirus
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV80670.1 [NCBI]
Genbank nucleotide accession
MZ501078 [NCBI]
CDS location
range 27338 -> 29722
strand +
CDS
ATGGCACTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGCCAACAGCCTGACATCCTTCGTTATCCAGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAGCGTCCACCTCTGGTTTTCCTTAAGACACTGGGAGGTAGTGGCGACTTAGGACAAGCACCTTACATTCACCTGATTAACCGTGATGAGAACGAACAGTATTACGCTGTGTTCACTGGTACGGGAATCCGTGTGTTTGACCTTGCCGGTAACGAGAAGCAAGTTAGGTATCCTAACGGTTCCAACTACATCCAGACCGCTCAGCCGCGTAACGACCTGCGAATGGTCACTGTAGCAGACTATACGTTCATCGTTAACCGTAACGTTGTTGTACAGAAGGACCCACTTTATATCAACTTACCGAATTATAACCCTAAGCAGGACGCTCTGATAAACGTTCGCGGTGGTCAGTATGGTCGTACCTTACAGATTATGATTAACGGTGGTACACAAGCCTCCTATCAGATTCCTGATGGTTCACAGCCAGCACACGTTAATAACACGGACGCTCAGTGGTTAGCAGAAGAGTTGGCTCGCCAGTGTAGAGCAAATGCTCCGGGATGGACCTTCAATGTTGGGCAGGGTTTTATCCACATCGTAGCACCTTCTGGTCAACAGATTGATTCCCTGATGACTAAGGATGGCTATGCTGACCAATTGATTAACCCTGTTACCCACTACGCTCAGTCGTTCTCTAAGTTGCCACCTAATGCCCCTAACGGCTACATGGTGAAAATCGTAGGGGACGCCTCTAAGTCTGCCGACCAGTATTACGTTAGGTATGACGCTGAGCGGAAAGTTTGGGCTGAGACTTTAGGTTGGAACACTGAGGACCAAGTTCTATGGAACACCATGCCACACGCTCTTGTGCGAGCCTCTGATGGTAATTTCGACTTCAAGTGGCTTGAGTGGTCTCCTAAGTCTTGTGGTGACGTTGATACTAACCCTTGGCCTTCTTTTGTTGGTTCAAGTATCAACGATGTGTTCTTCTTCCGTAACCGTTTAGGTTTCCTTAGTGGTGAGAATATCATCCTTAGTAGAACAGCTAAGTATTTTAACTTCTACCCAGCGTCAATCGCAAACTTGAGTGATGATGACCCAATCGACGTAGCTGTAAGTACCAACCGAATCGCAATCCTTAAGTATGCCGTTCCGTTCTCCGAAGAGTTACTCATCTGGTCAGACGAAGCGCAATTTGTCTTGACGGCATCTGGTACGCTTACTGCACGTTCCGTTGAGTTGAACCTAACGACTCAGTTTGACGTACAGGACCGAGCGAGACCTTTTGGGATTGGGCGTAATGTTTACTTTGCTAGTCCGAGGTCCAGCTTCACGTCCATCCACAGGTACTACGCTGTGCAGGATGTAAGCTCCGTTAAGAACGCTGAGGACATTACAGCACACGTTCCTAACTACATCCCTAATGGTGTGTTCAGTATCTGCGGTAGCGGTACGGAAAACTTCTGTTCGGTATTATCTAACGGGGACCCAAGTAAAATCTTCATGTACAAATTCCTGTATCTGAACGAAGAGTTAAGGCAACAGTCGTGGTCTCATTGGGACTTTGGGGAAAACGTACAGGTTCTAGCGTGTCAGAGTATCGGCTCAGATATGTATGTTATTCTTCGCAATGAGTTCAATACGTTCCTAGCTAGAATCTCTTTCACTAAGAACGCCATTGACTTACGAGGCGAACCTTACCGTGCCTTTATGGACATGAAGATTCGCTACACGATTCCGAGTGGAACATACAACGATGACACGTTCACTACCTCTATCCATATTCCAACCATTTATGGTGCAAACTTCGGGAGGGACAAAATCACCGTATTGGAGCCTGATGGTAAGATAACCGTATGTGAGCAACCAACTGGTGGGTGGAACAGTGACCCTTGGCTGAGACTCAGCGGTAACTTAGAGGGACGTGAAGTGTTCATTGGGTTCAACATCCACTTCGTCTATGAGTTCTCTAAGTTCCTCATCAAGCAAACTGCCGACGATGGGTCTACCTCCACGGAAGACATTGGGCGATTACAGTTACGCCGAGCGTGGGTGAACTATGAGGATTCTGGAGCGTTCGACATTTATGTTGAGAACCAATCGTCCAACTGGAAGTACACAATGGCTGGTGCCCGCTTAGGCTCTAACAGTCTGAGGGCAGGTCGGCTGAACTTAGGGACCGGACAATACCGATTCCCTGTGGTGGGCAACGCTAAGTTCAATACCGTATACATCGTGTCAGATGCGACTACCCCTCTGAACATCATTGGGTGTGGCTGGGAAGGTAACTACTTACGGAGAAGTTCCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8cd9d37321007cb12a17a84175e978a3a2a021dea4e9b128096f2a8bd1ce382a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3281
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank