Protein

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UniProt accession
A0A1L2CUF4 [UniProt]
Protein name
RNA ligase 1 and tail fiber attachment catalyst
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MRTKQIFDDLMNLTAKNDAFMWKDFVSPAGGLFRIFSYRLASYSDFLEPNALECRGSMFKVDDEGNFVGIASRTPMKFFNAYENPFTMYDKDTLSSEIAVVMDKLDGSIISTFMDVDFVVRTKSHASLHSDHAYNSTAMLIADKELYNEVHYAESMGYTVNMEYTSPEYRIVLPYQEDNLTVLNLRHRETGELLIGERLKEFSKILYERSVFAKHGEIDATFPMKETLKESIDAVRGMADIEGYVLILKDGRMCKIKTDWYCALHFTKDSINVDSRLYDAIITGASDDLKQMFSTDLYAMKKIEKMEQLIFSCYNKLVHDVESFYEENKHLERKEYALKVQSTLPNELGMPGLAFSLYASKPVDYKGQMLKYMKDVLVNFEV
Physico‐chemical
properties
protein length:382 AA
molecular weight: 44090,98450 Da
isoelectric point:5,20557
aromaticity:0,12042
hydropathy:-0,28665

Domains

Domains [InterPro]
DC_1201
ATT
1–55
DC_1201 IPR019039 IPR049042
IPR012648
Unmapped
5–364
IPR012648
IPR019039
STR
53–261
IPR019039 Coil
G3DSA:1.10.3550.20
RBD
259–381
G3DSA:1.10.3550.20
A0A1L2CUF4
1 382
Architecture
ATT
STR
RBD
ATT 1-55 | STR 56-261 | RBD 262-381 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage vB_PcaM_CBB
[NCBI] 		2772511 Uroviricota > Caudoviricetes > Mimasvirus >
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMM43648.1 [NCBI]
Genbank nucleotide accession
KU574722 [NCBI]
CDS location
range 39142 -> 40290
strand +
CDS
ATGCGTACTAAACAAATTTTTGATGATTTAATGAATCTTACTGCAAAGAATGATGCATTTATGTGGAAAGATTTTGTTTCTCCTGCTGGTGGTTTATTCCGTATTTTTTCTTACCGCCTCGCAAGTTACTCTGACTTCTTGGAGCCTAATGCTTTAGAATGTCGTGGTTCAATGTTTAAAGTTGATGATGAAGGTAATTTTGTTGGTATTGCTTCTCGTACCCCAATGAAGTTCTTCAACGCATATGAAAACCCATTCACTATGTATGATAAAGATACTTTAAGTTCTGAAATTGCAGTTGTAATGGATAAACTTGATGGTTCTATTATCAGTACTTTTATGGATGTGGATTTTGTTGTACGTACTAAATCTCATGCATCACTGCATTCTGACCATGCGTATAACAGTACTGCAATGTTGATTGCAGATAAAGAATTATACAATGAAGTTCATTACGCAGAATCAATGGGCTATACGGTGAATATGGAATATACTTCACCTGAGTATCGTATTGTACTTCCGTATCAGGAAGATAATTTAACGGTACTGAATCTGCGTCATCGTGAAACAGGTGAACTTCTTATTGGAGAACGTCTTAAAGAGTTTTCTAAAATTCTGTATGAACGTTCTGTATTTGCTAAACATGGCGAAATCGATGCAACTTTCCCTATGAAGGAAACTTTAAAAGAAAGTATTGATGCGGTTCGTGGTATGGCTGATATTGAGGGTTATGTATTGATTCTCAAAGATGGTCGTATGTGTAAGATTAAGACTGACTGGTATTGTGCACTGCACTTTACTAAGGACAGCATTAATGTTGATTCACGTCTATATGATGCGATCATTACTGGTGCGTCTGATGATCTGAAACAAATGTTTAGTACTGATCTGTACGCGATGAAAAAGATTGAAAAAATGGAACAGCTAATTTTTTCATGCTATAATAAGCTCGTACATGACGTAGAAAGTTTCTACGAAGAAAACAAACATCTTGAGCGTAAAGAATATGCATTAAAAGTTCAATCAACATTACCGAATGAACTTGGTATGCCAGGTTTAGCGTTCTCCCTTTATGCATCGAAGCCCGTCGATTATAAAGGTCAGATGTTGAAATACATGAAGGATGTACTAGTTAATTTCGAAGTATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0005524 ATP binding Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0046872 metal ion binding Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0003972 RNA ligase (ATP) activity Molecular Function IEA:InterPro (UniProt)

Tertiary structure

PDB ID
9a64cae68ae63dfe0e3754a11706a552f2c9517263a17b2d15e3149de2347787
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8888
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50