Protein

View in Explore
Genbank accession
XCH41417.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGYFQMTRNVEELFGGVITAPHQIPFTYKSNVGGETFLSLPFYPVTGVVTINGGMQVPLDNFEIEGNTLNLGRALSKGDVVYCLFDKILSPEDTAKGIRIYKFQAVGGETEFTPDFTSYGVQSLYIGGEYKTPEIEYSYNSTTGKVSLQTALTAGVWVVAEMSVKQPNISPLFDRSIQEIARSANVKDSEVIVSTDTISLLDGKKVVYDIATQTSYGLPTIPDGSVISSVSGGKLNYNPGDVQVNLLPLPNSAALLRAELGSPTGTNLVNFKNSAVGALVRSVTSKLEDNPISVKDYGCKGDGVTDDTAGLQLAVAGALSGLVIYFPKGIYLTSLPLNFTKPVTLIGEKGARIELTGGDHDYVIQFDFRDTDLMYWGYEAYMSNIIVDGKGFAKDGFSLRGVISSRFDNLRATNISRAGLHCWWTQCNLYNNFHCSKNVELFTTTPKYGILIDYEEGSPNKRGTSADTFINPVCEHTTEAGIEATFCINTIFMNGTSEGCRFGIAFGHESDLGQTAVTNTVIGMDMEVNSDGDVLLRKTATSNLFLGVMAGYSSPSSQIQGAEFNRWIGGSSSGFHFYGGTKGNKIEGTMLLGASATILDDDKTNDWDSLYNISNATYTGSTNPVNKRVQHDGTGTVTIDPMKCSLATINATSSTITINTLDNARDGMRMDMIIYNTSGQPLTVNWGDSFRIGGFVPPESGKQKGLSFVWDANFAHWYCVGMSADGLVY
Physico‐chemical
properties
protein length:729 AA
molecular weight: 78818,71670 Da
isoelectric point:4,89647
aromaticity:0,10014
hydropathy:-0,11811

Domains

Domains [InterPro]
DC_0063
STR
1–718
DC_0063
G3DSA:3.30.2020.50
ATT
161–249
G3DSA:3.30.2020.50 IPR012334
IPR011050
STR
285–645
IPR011050
IPR024535
ENZ
292–367
IPR024535
XCH41417.1
1 729
Architecture
STR
ATT
STR
STR 1-160 | ATT 161-249 | STR 250-718 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCH41417.1
1 729
Domain Start End Length (AA) Confidence
N-terminal 1 308 308 0,9935
Central domain 309 623 316 0,9895
C-terminal 624 729 105 0,9641
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-308
Central
309-623
C-terminal
624-729

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_STmST313_KE30
[NCBI] 		3161180 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCH41417.1 [NCBI]
Genbank nucleotide accession
PP856728 [NCBI]
CDS location
range 8647 -> 10836
strand -
CDS
ATGGGGTATTTTCAAATGACCAGAAATGTAGAAGAATTATTCGGCGGCGTGATCACAGCTCCCCACCAGATTCCTTTCACGTATAAATCAAATGTCGGTGGAGAAACTTTCCTTTCCTTGCCGTTCTATCCTGTCACTGGCGTAGTCACAATCAACGGTGGTATGCAAGTTCCGTTAGACAACTTTGAAATCGAAGGAAATACGTTGAATCTCGGGCGCGCATTGTCCAAAGGCGATGTTGTGTATTGCTTATTCGATAAAATTCTTTCGCCAGAAGATACAGCCAAAGGTATCCGCATATACAAATTTCAGGCCGTAGGAGGTGAAACCGAGTTCACTCCTGATTTCACATCCTATGGTGTCCAATCTCTTTATATCGGTGGTGAGTACAAAACACCCGAAATTGAATATTCCTATAACAGCACGACAGGGAAAGTGTCTTTGCAAACTGCACTGACTGCAGGCGTTTGGGTAGTCGCTGAAATGTCTGTTAAACAACCGAATATCAGTCCGTTGTTTGACCGCAGTATTCAAGAAATTGCCCGTTCTGCTAATGTTAAAGACTCTGAAGTCATCGTTAGTACGGACACCATATCTTTGTTGGATGGGAAGAAAGTTGTTTATGACATAGCGACGCAAACCAGTTATGGTTTACCAACCATTCCTGATGGTTCTGTCATTTCTTCTGTATCTGGTGGGAAATTGAATTACAACCCAGGAGATGTTCAGGTTAATTTGTTGCCATTGCCTAATAGTGCTGCATTACTGAGAGCAGAATTAGGTAGTCCAACGGGTACAAATTTGGTTAATTTTAAGAATTCGGCAGTTGGTGCATTGGTACGTTCTGTTACTTCTAAATTAGAAGATAATCCGATAAGTGTTAAGGATTATGGTTGCAAAGGAGATGGTGTTACCGATGATACCGCTGGATTACAATTAGCAGTTGCAGGGGCTTTATCAGGATTGGTCATATACTTTCCTAAAGGGATTTATCTTACCAGTTTACCATTGAATTTTACCAAACCTGTGACTTTAATAGGAGAGAAGGGCGCTCGTATTGAATTAACTGGTGGTGATCATGATTATGTTATACAATTTGATTTTCGTGATACAGACCTGATGTATTGGGGCTACGAAGCATATATGAGCAATATTATTGTAGATGGAAAGGGATTTGCTAAAGACGGGTTTTCACTTCGAGGAGTAATTTCTTCTAGATTTGATAATTTACGTGCCACAAATATTTCTCGTGCGGGGCTTCATTGTTGGTGGACTCAATGTAATTTGTATAATAATTTTCATTGTAGTAAGAATGTGGAATTGTTTACTACTACACCAAAATATGGGATATTAATCGATTATGAAGAAGGGTCTCCGAATAAAAGAGGTACTTCTGCCGATACGTTTATTAATCCTGTTTGTGAACATACGACAGAAGCAGGTATCGAAGCAACATTCTGTATCAATACTATATTTATGAATGGTACTTCTGAAGGTTGTCGTTTCGGTATCGCCTTTGGACATGAATCTGATTTGGGGCAAACTGCGGTTACAAATACGGTTATTGGAATGGACATGGAAGTTAACTCTGATGGCGATGTGTTGTTGCGTAAAACCGCGACAAGTAACTTATTTTTGGGGGTTATGGCGGGTTATAGTTCTCCATCGTCGCAAATACAAGGCGCTGAATTTAACCGTTGGATTGGTGGTTCTTCTTCTGGATTCCATTTTTATGGAGGTACAAAGGGGAATAAAATAGAAGGAACTATGCTATTAGGCGCGTCGGCCACTATTTTAGATGATGATAAAACAAATGACTGGGATTCTTTGTATAACATAAGCAATGCGACTTATACAGGTTCGACTAACCCTGTTAACAAAAGGGTTCAACATGATGGGACAGGGACAGTAACCATAGATCCCATGAAATGTAGTTTAGCAACGATCAACGCGACATCTTCCACAATAACCATCAATACTTTAGATAATGCCAGAGACGGGATGCGTATGGACATGATTATCTATAATACATCAGGGCAACCACTTACTGTAAATTGGGGAGACAGTTTCCGTATTGGGGGATTTGTTCCTCCAGAATCTGGTAAACAAAAAGGATTGTCCTTTGTGTGGGATGCTAACTTTGCTCATTGGTATTGTGTTGGTATGTCTGCAGATGGTTTAGTTTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cfca3f73f96a3996b13c8d2e1591e16742f72e81447c7b1222ee129d5e923b51
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7674
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50