Protein

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Genbank accession
AFD02869.1 [GenBank]
Protein name
phage tail fiber-like protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,58
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MSLTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYVVDNRPGDVLYTNVAPIDANSNLDLTSPNNVLYKYNSVEGGIIVPRGCSLVGTDLRRTKIIPKYVPYPTTYAAKGMNTEDQVPPRTAIFKVTGGTYFWQFSFFDGAEEGVYFKPDSVETLAPKFSHHRLTCFEFADGLNPLSKLITDGTVPNTDYSAVPNILERTDLEIYYQKVSKAFATIPDTSGDPAADQIQPRVEENRIVGPISDEYRVLQITRNGQTATAVTVDEFDNPRDHGFSVGVNINVSGVTGSTGPQSEVDAGLYNGSFTVTSASGNVFTYQMQGEPTGNAVGSNITVKTEIDTVDSASPYAFNLSLRSVWGMNGMHANGSKATGFKSMVVAQFTGLSLQKDDRAFVRYNQSTGNYDAATSGDGAHLDGFAEYRKGWGHEHIKCSNDSFIQAVSVFAVGYFGHFTAESGADMSITNSNSNFGNTALRAAGFKAKSFSKDKAGAITHIIPPKALNVISTLANGSNGTNTITLTSAKVGDALGIIQGMTVSGTNIPAGTTVGTVNTNTGAITLNNTLSGNIVSGNIIFGEETSVNWVNIEIQRTKVVNASLAGQGGTPGTRLYLYGYTTEASPPTTRVQGFTVGARQDGTGASAIADKINCLLVANGATTATTQGASISPYGPSVSGLAAGVAGSPIQYDSATYTINGVAGSVGGWYLSVTANSEIYQTLSTNTQYNNVNFTPSTFLKRIPDPRDLQDRTYRVRMVIDKDKSNPLPRDPISGFVMQPLNSDTTTFNLTKCFYIYDIEIVQPFERGVNDGIYYLTLLCGSIAPSTSNFDNRKFSQNVNEVYPTFDRDNPVADPLPAVSVADNVINGLVNATDGATPTPAKDPKRSITKEGIQFLLTDTGWTQPGTTPNYDSNYAKLSNVQLTARAGDEETRKI
Physico‐chemical
properties
protein length:967 AA
molecular weight: 103969,38470 Da
isoelectric point:5,27781
aromaticity:0,09307
hydropathy:-0,27022

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFD02869.1
1 967
Domain Start End Length (AA) Confidence
N-terminal 1 82 82 0,9379
Central domain 83 312 231 0,9673
C-terminal 313 967 654 0,1815
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-82
Central
83-312
C-terminal
313-967

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage metaG-MbCM1
[NCBI] 		1079999 Uroviricota > Caudoviricetes > Pantevenvirales > Galenevirus > Galenevirus mbcm1
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
4af52661d75907e743fc970a51fb4655d9970abde5d61ab5418d5626e28a0f0a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3733
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50