Protein

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Genbank accession
AUS02121.1 [GenBank]
Protein name
tail spike protein with colonic acid degradation activity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTIPKITPYTGGVANPDGSQAQTEFTQNMFDQLSYEANLSTELNNTVDGINDTAIQVDADATSASQSAAAAEAAVSGLDYQGLWPDTGGSANKGETWQTQTGGTPTGQYFTALQNTTVDPVSDNANWRAVVSDYGNKFTSSKSDKSINRGHKRVQILSKGNGSFLQTIQQEYDKYPESCRFTASDGTLFTLSHEKGIQLNQINSSTPVHDAMQFLEAILIEPQEQGGIYGTVYAKTGNDIEVDFNGEIYEVDTPVVIPQCDRVIFKNGYIKNSGAITGDYVIKMVNAQDIFFDYTNITWRDFTFDGNHLSGCVQLQFYLGVIFDNCKFYRFNTYGLQTITQGHEAKINKCRFAEHVWGDAGWAPAGQRDHWSGVGINLRTPDNEITDSVFMYSKGGIQIEGPYNTVSVVHPYGMRDYSVFFDNTDIAVVGSKLVDSYLDNAEVWIRDPYGVSVTDCDFLGNTDDPYFAFIRLIPSSTNLYIRGLDISSNHFRNIDSQDVMSVCVDAGYELEKSPSTFLGEYADGVVIDSDSEYVRYLGYNYISYFTVLPSVTTPYTCDATTYSNPDDDPNLVTAGGTFSRGNVYTTKIADNQYLENVKIATTRPSAKLTASDAYLWEFDFEKVMPIGYAFNKVDYSIQNTSGTSFEKSKIRLNDGYKIRIQTENIMTGSSTVYVSADCSQLESSSLEGGNPIVMTAT
Physico‐chemical
properties
protein length:697 AA
molecular weight: 76993,00750 Da
isoelectric point:4,46808
aromaticity:0,11765
hydropathy:-0,36628

Domains

Domains [InterPro]
DC_0090
STR
1–696
DC_0090
IPR039279
Unmapped
234–677
IPR039279
IPR011050
STR
261–549
IPR011050
AUS02121.1
1 697
Architecture
STR
STR 1-696 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS02121.1
1 697
Domain Start End Length (AA) Confidence
N-terminal 1 209 209 0,9969
Central domain 210 561 353 0,9879
C-terminal 562 697 135 0,8616
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-209
Central
210-561
C-terminal
562-697

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.095.A._10N.286.46.E10
[NCBI] 		1881403 No lineage information
Host Vibrio sp. F12
[NCBI] 		2070776 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS02121.1 [NCBI]
Genbank nucleotide accession
MG592664.1 [NCBI]
CDS location
range 28320 -> 30413
strand +
CDS
ATGACAATTCCAAAGATTACACCATATACCGGCGGCGTTGCTAATCCAGATGGCAGCCAAGCGCAAACTGAATTTACGCAAAACATGTTTGACCAGTTGAGTTATGAAGCTAATTTATCAACTGAGCTAAACAACACTGTTGATGGAATTAACGACACAGCAATTCAAGTTGATGCAGACGCCACTAGCGCATCACAAAGCGCGGCTGCGGCTGAGGCTGCTGTCTCTGGTTTGGATTATCAAGGGTTGTGGCCTGACACAGGAGGCAGTGCCAATAAAGGCGAAACTTGGCAAACACAAACAGGCGGAACACCTACAGGTCAATACTTTACAGCTCTACAAAACACAACCGTTGACCCCGTTAGTGATAATGCGAATTGGCGAGCGGTGGTTTCTGATTACGGAAACAAATTCACGTCAAGTAAAAGCGACAAATCGATAAATAGGGGTCATAAAAGAGTTCAAATTTTATCCAAAGGTAACGGAAGCTTCCTCCAAACAATTCAGCAGGAATATGACAAGTATCCAGAATCATGCAGGTTTACAGCTAGTGACGGCACGCTTTTTACCCTTAGTCACGAAAAGGGAATACAACTTAACCAGATAAACTCAAGCACACCTGTTCATGATGCTATGCAATTTCTAGAAGCGATACTTATTGAGCCTCAAGAGCAAGGCGGTATTTATGGCACTGTGTATGCAAAAACAGGAAACGATATTGAGGTTGATTTCAACGGTGAAATATACGAAGTTGATACGCCAGTTGTCATCCCTCAGTGCGATCGAGTTATCTTCAAGAATGGTTATATTAAAAACTCTGGAGCTATAACTGGTGACTACGTGATCAAGATGGTGAACGCTCAAGATATCTTTTTTGATTACACAAATATAACTTGGCGTGATTTTACATTCGATGGCAATCACCTTAGCGGATGCGTACAGCTTCAGTTCTATTTAGGCGTTATATTTGATAACTGTAAGTTTTACCGTTTTAACACTTACGGATTGCAAACTATTACTCAAGGCCATGAGGCTAAGATAAATAAATGTAGATTTGCCGAGCACGTTTGGGGAGATGCTGGCTGGGCACCAGCAGGTCAGAGGGACCACTGGTCTGGTGTTGGTATAAACCTAAGAACTCCAGACAATGAAATTACTGATTCTGTATTCATGTATTCTAAAGGGGGTATACAGATTGAGGGGCCGTACAACACGGTTTCTGTAGTTCACCCTTATGGTATGCGAGATTATTCCGTTTTCTTCGATAATACAGACATTGCAGTCGTGGGGAGCAAGCTTGTTGACTCATACCTTGACAATGCAGAGGTTTGGATTAGAGACCCTTATGGCGTTAGTGTAACGGATTGCGATTTCTTGGGTAATACTGACGACCCCTACTTTGCATTCATTAGATTAATACCATCATCTACAAATCTATACATCCGAGGCCTGGATATAAGTAGCAACCATTTCAGGAATATAGACTCTCAAGATGTAATGAGTGTTTGTGTAGATGCTGGTTATGAGCTAGAAAAATCTCCGAGCACATTTTTAGGAGAGTATGCTGATGGTGTTGTTATTGATTCCGATAGTGAATACGTAAGGTATTTAGGGTATAACTACATAAGCTATTTTACAGTCCTTCCGTCCGTTACAACGCCGTACACTTGTGATGCTACTACGTATTCGAATCCAGATGATGATCCAAATCTTGTTACAGCTGGAGGAACGTTTAGCAGAGGCAATGTATACACAACAAAGATTGCTGACAATCAATATCTAGAAAACGTGAAGATCGCAACAACAAGGCCTTCCGCCAAGCTTACCGCAAGTGACGCATATTTGTGGGAGTTTGATTTTGAAAAGGTCATGCCTATTGGATATGCATTTAACAAGGTTGATTACAGTATCCAGAATACTAGCGGGACATCTTTTGAAAAATCAAAAATTAGACTAAATGATGGGTACAAGATACGCATACAGACAGAAAATATAATGACGGGAAGCTCAACTGTATACGTGTCGGCTGACTGCTCGCAGTTAGAATCCTCATCCCTTGAGGGTGGGAATCCAATAGTAATGACCGCAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3094de613a902414aca787414e57649b73fbdc92f0c7fdc4c4b0597bc6809315
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6740
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank