Protein

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Genbank accession
QKN86106.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAEITKARTLTYDGEEVYARSHIDVVDGLDKSKLLTDEQKRKLENFNADAIDVATPSKNGLMSAQDKTKLDSLKQFDPDTLTNATTQKAGLMSAEDKRRLDELKTNSNAYDKGLSNATASSSVIAANINKWPNATQTVNLSKKVSECQNGIVLVWRSDTEDDNYHYQYVSKYHVSAHSTTKIVHLIPTNSANEFCTKTVIVKDNVVTGTNDNHNRTTKANKVRLHEILEF
Physico‐chemical
properties
protein length:230 AA
molecular weight: 25651,27760 Da
isoelectric point:6,65826
aromaticity:0,05652
hydropathy:-0,68522

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus virus pSp_SNUABM-J
[NCBI] 		2736346 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus pseudintermedius
[NCBI] 		283734 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKN86106.1 [NCBI]
Genbank nucleotide accession
MT423823.1 [NCBI]
CDS location
range 68 -> 760
strand +
CDS
ATGGCTGAAATTACTAAGGCTAGAACATTAACTTACGATGGTGAAGAGGTTTATGCTAGATCGCACATTGATGTTGTTGACGGTTTAGATAAATCAAAGTTATTAACTGACGAGCAAAAACGAAAACTAGAAAACTTTAATGCGGATGCAATTGATGTTGCAACGCCATCGAAAAATGGTTTGATGTCCGCGCAAGACAAAACTAAACTGGACAGCTTAAAACAGTTCGACCCTGATACACTCACAAATGCGACTACTCAAAAAGCGGGCTTAATGTCCGCTGAAGATAAGCGTCGCCTTGATGAGTTGAAAACAAATTCAAACGCTTACGATAAAGGGTTATCAAATGCAACTGCATCCAGTTCAGTTATTGCAGCAAACATCAACAAATGGCCAAACGCAACTCAAACTGTAAATTTAAGTAAAAAAGTGAGCGAATGCCAAAATGGCATTGTGTTGGTATGGCGTTCTGACACTGAAGATGATAACTACCATTATCAATATGTATCTAAGTATCACGTGTCGGCTCATAGTACAACAAAAATTGTGCATCTAATCCCTACAAATTCCGCGAATGAATTTTGTACAAAAACAGTCATAGTAAAAGATAATGTCGTTACTGGTACGAATGACAACCATAATAGGACAACCAAAGCAAACAAAGTACGCTTACATGAAATTTTAGAATTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2a461b62ad5ddd2d0ab63d995ca80bb6ca37967cefe6cf96ede05de7a9b4e2fd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8032
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Two novel bacteriophages control multidrug- and methicillin-resistant Staphylococcus pseudintermedius biofilm Kim,S.G., Kwon,J. and Park,S.C. 2021 33869236 GenBank