Protein

View in Explore
Genbank accession
XYS97030.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MAAQLEDLTMSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLVAQHRGELYLFDERDGRLLMGQPLVHDYLKADDYRQLRAATVADDLFIANLSVKPEADRTDIKGVDPNKAGWLYIKAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVDPDANAATIAGYLNQRGVQDGYIAFRGDADIHVEVSTDMGNNYGIASGGMSLNATADLPALLPGAGTPGVGVQFMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYSLNELDYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQDNEKVQNAFHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVDGELELTKQHWDLIKDASAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTATRAVLHRYSVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLNAGEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQIYRRV
Physico‐chemical
properties
protein length:835 AA
molecular weight: 93035,88370 Da
isoelectric point:5,81016
aromaticity:0,10659
hydropathy:-0,32419

Domains

Domains [InterPro]
DC_0058
STR
1–835
DC_0058
IPR058003
TTP
10–825
IPR058003
XYS97030.1
1 835
Architecture
STR
STR 1-835
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYS97030.1
1 835
Domain Start End Length (AA) Confidence
N-terminal 1 148 148 0,9841
Central domain 149 347 200 0,2598
C-terminal 348 835 487 0,2917
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-148
Central
149-347
C-terminal
348-835

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_YQZQ
[NCBI] 		3436857 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYS97030.1 [NCBI]
Genbank nucleotide accession
PV752215.1 [NCBI]
CDS location
range 24991 -> 27498
strand +
CDS
GTGGCGGCGCAGCTTGAGGACCTGACCATGAGCTACAAGCAATCCGCGTACCCCAACCTGCTGATGGGCGTGAGCCAGCAGGTGCCGTTCGAGCGCCTGCCAGGGCAGCTCAGCGAGCAGATCAACATGGTGTCGGACCCCGTGTCCGGCCTTCGCCGCCGTAGTGGTATCGAGTTGATGGCGCACCTGCTGCACACTGACCAGCCCTGGCCGAGGCCGTTCCTGTACCACACCAACCTGGGCGGTCGCAGCATTGCGATGCTGGTGGCGCAGCACCGGGGCGAGCTATACCTGTTCGACGAGCGGGATGGCCGCCTGCTGATGGGGCAGCCCCTGGTGCATGACTACCTCAAGGCCGACGATTACAGGCAGCTCCGGGCCGCCACGGTGGCTGACGACCTGTTCATCGCCAACCTGAGTGTGAAGCCCGAGGCCGACCGCACCGACATCAAGGGCGTAGACCCCAACAAGGCCGGTTGGCTGTACATCAAGGCAGGCCAGTATTCGAAGGCATTCTCCATGACCATCAAGGTCAAGGACAACGCCACCGGCACCACCTACAGCCACACGGCCACCTACGTGACGCCGGACAACGCCAGCACGAACCCCAACCTCGCTGAGGCGCCATTCCAAACGAGCGTAGGCTACATCGCGTGGCAGCTCTACGGCAAGTTCTTCGGTGCGCCGGAGTACACTCTGCCTAACTCGACGAAGAAGTACCCGAAGGTGGACCCGGACGCCAACGCGGCAACCATAGCCGGCTACCTCAACCAGCGTGGAGTGCAGGACGGGTACATCGCATTCCGGGGCGACGCCGACATCCACGTCGAAGTGTCCACGGACATGGGCAACAACTACGGCATCGCTTCGGGTGGTATGAGCCTCAACGCCACGGCAGACCTGCCGGCCCTGCTACCCGGCGCCGGTACTCCTGGCGTCGGCGTGCAGTTCATGGACGGCGCGGTCATGGCCACCGGCTCCACCAAGGCGCCCGTGTACTTCGAGTGGGATTCCGCTAACCGCCGCTGGGCGGAGCGGGCCGCCTACGGCACCGATTGGGTCCTGAAGAAGATGCCCTTGGCCCTGCGCTGGGACGAAGCCACCGATACCTACAGCTTGAACGAGCTGGACTATGATCGGCGGGGCTCCGGCGACGAGGACACGAACCCCACGTTCAACTTCGTCACCCGAGGCATCACCGGCATGACAACCTTCCAGGGTCGCCTCGTTCTCCTGTCGCAGGAGTACGTCTGCATGTCGGCCAGCAACAACCCGCACCGCTGGTTCAAGAAGTCGGCAGCCGCGCTGAACGACGACGATCCTATCGAGATCGCCGCTCAGGGTAGCTTGACCGAGCCGTACGAGCATGCGGTCACCTTCAACAAGGACTTGATCGTCTTCGCCAAGAAGTACCAGGCCGTGGTCCCAGGTGGTGGCATAGTGACCCCACGAACAGCCGTCATCAGCATCACCACGCAGTACGACCTCGATACCAGGGCGGCACCTGCCGTGACTGGACGCAGCGTGTACTTCGCTGCGGAGCGTGCCCTGGGTTTCATGGGCCTGCACGAGATGGCCCCGTCGCCGTCCACGGACAGCCACTACGTCGCCGAGGACGTTACCAGCCACATCCCGAGCTACATGCCGGGGCCGGCTGAGTACATCCAGGCGGCGGCCTCCAGCGGCTACCTGGTGTTCGGCACCAGCACGGCGGACGAGATGATCTGCCACCAGTACCTCTGGCAGGACAACGAGAAAGTCCAGAACGCCTTCCACCGATGGACGCTGCGGCATCAGATCATCGGCGCGTACTTCACCGGCGACAACCTGATGGTCCTGATCCAGAAGGGCCAGGAGATCGCCCTGGGCCGGATGCACCTGAACAGCCTGCCAGCCCGCGAGGGTCTGCAATATCCGAAGTACGATTACTGGCGGCGTATCGAGGCGACCGTCGATGGTGAGCTGGAGCTGACCAAGCAGCATTGGGACCTGATCAAGGATGCCTCTGCCGTATACCAGCTCCAGCCCGTGGCCGGTGCCTACATGGAACGTACCCACCTCGGCGTGAAGCGCGAGACGAATACGAAGGTGTTCCTCGACGTGCCCGAGGCCGTAGTCGGTGCCGTGTACGTGGTCGGCTGTGAGTTCTGGTCCAAGGTGGAGTTCACTCCACCGGTGCTACGGGACCACAACGGGCTGCCCATGACCGCGACCCGCGCAGTGCTCCACCGGTACAGCGTGAACTTCGGATGGACTGGCGAGTTCCTGTGGCGCATCAGCGACACGGCCCGCCCTAACCAGCCGTGGTACGACACGACGCCCCTGCGGCTGTTCAGTCGGCAACTCAACGCCGGCGAGCCACTGGTGGATAGTGCCGTGGTGCCGCTGCCGGCCAGGGTGGACATGGCCACGTCCAAGTTCGAGTTGAGCTGCCATAGTCCGTACGACATGAACGTCCGGGCTGTCGAGTACAACTTCAAGTCCAACCAAATCTACCGGAGGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
bdf6fb69680e940e80df5cea08186c65ae3f926ce71fffd52d78b672ffe02aab
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8758
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel pseudomonas aeruginosa phage vB_PaeP_YQZQ Zhang,L. 2024-11-16 — GenBank