Protein

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Genbank accession
WZK98923.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
Protein sequence
MATRLHGILLDGLNNPIINATVALIAKGNTITVLNGSEAIFRTDGSGAYNVTVQTGHYKVIIGPQGIEPYKAGEIVIYGDSPEGSLNGYLINGAPEELTPDVIKQVQQLVANSEEYALQAGRSAAAANADATDARNSKAAAATSASEALTYKNDSKTNADAAKQAQSSAAGSANTATKAVTTITNLKKDVEKLKSDTQTIKNSSVSETQAIKDAAVSETTALKDAAAASATKAANSATEAGKQAGNAGTSATNAKNDADRAKTEADRAESAANNAPEIQPLPDVWIPFNDSLDMITGFSPSYKKIVIGDDEITMPGDKIVKFKRASTATYINKSGEFVVAKIDEPRFEREGLLIEGQRTNYILNSLTVSKWGASSWLTISSSGVDSFGFTYGRFDVQSSNVGSTTSGNIAVAPSPRAFDVTGGEKYCTISCRCKCESDIDIRCRLRFENYDGTATSFIGDAYMNMQTLDITTTGGAANRITAKAVKDNATGWIFFEATIKALDTENMIGGQVQIAPSQRVGSFADGDHIIVATPQFEGGATASSFIISDTVAATRASDTVTVPIKNNIYSIPFTILCEVHKNWYKTPNAAPRVFDTSGYQTGAAIILGFGRSTDYDGFPYCDIGRANIRVNENASLEKMVMGMRVKADQLTCAISNGRISSETKTTWTYIQSSATIRIGGQTTTGQRHLFGHVRNFRVWHKALTDRELKESV
Physico‐chemical
properties
protein length:712 AA
molecular weight: 75805,72800 Da
isoelectric point:5,96232
aromaticity:0,07022
hydropathy:-0,27767

Domains

Domains [InterPro]
IPR013609
ATT
1–134
IPR013609 Coil Coil
IPR008969
ATT
5–79
IPR008969
DC_1979
STR
20–712
DC_1979
WZK98923.1
1 712
Architecture
ATT
STR
ATT 1-134 | STR 135-712
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WZK98923.1
1 712
Domain Start End Length (AA) Confidence
N-terminal 1 542 542 0,4321
Central domain 543 701 160 0,4348
C-terminal 702 712 10 0,9965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-542
Central
543-701
C-terminal
702-712

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Dru_SM1
[NCBI] 		3140151 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZK98923.1 [NCBI]
Genbank nucleotide accession
PP596835 [NCBI]
CDS location
range 18536 -> 20674
strand +
CDS
ATGGCTACGCGCTTGCACGGCATCTTGCTGGATGGGTTGAATAATCCAATTATTAACGCTACAGTTGCTCTTATTGCTAAAGGGAACACAATTACCGTTCTTAATGGTAGTGAGGCTATATTTCGCACTGACGGATCCGGTGCGTATAATGTAACTGTCCAGACTGGTCATTATAAAGTAATCATCGGACCTCAAGGTATTGAGCCTTATAAAGCTGGGGAGATTGTTATTTATGGTGACAGTCCTGAAGGTTCGCTGAACGGATATTTAATTAACGGGGCTCCAGAAGAATTAACTCCAGATGTTATCAAACAAGTCCAGCAACTTGTGGCTAACTCTGAAGAATATGCTTTGCAAGCTGGGCGTTCTGCTGCGGCAGCAAACGCAGACGCTACGGACGCACGTAACAGTAAAGCGGCGGCTGCAACCTCAGCAAGTGAAGCATTAACTTACAAGAATGATTCTAAAACTAACGCGGATGCGGCTAAACAAGCCCAGTCCAGTGCTGCTGGTTCTGCTAACACTGCAACCAAAGCTGTAACCACAATAACAAATCTCAAAAAGGATGTTGAAAAGTTAAAGTCGGATACACAGACTATTAAGAATAGTTCAGTAAGCGAGACGCAAGCAATTAAGGACGCCGCTGTGTCCGAAACTACCGCGCTAAAAGACGCTGCCGCTGCTTCAGCTACGAAAGCAGCTAATAGCGCCACCGAAGCCGGAAAACAAGCAGGTAACGCAGGTACAAGCGCAACAAACGCTAAGAACGATGCAGACCGCGCAAAGACGGAAGCTGACCGTGCGGAATCTGCTGCCAACAATGCACCAGAAATTCAGCCGTTACCTGATGTGTGGATACCGTTTAACGATTCTCTAGATATGATTACGGGCTTTTCGCCTTCATATAAAAAGATTGTTATTGGTGACGATGAAATCACAATGCCTGGCGACAAGATTGTTAAGTTTAAGCGAGCTTCAACTGCGACATATATTAATAAATCGGGTGAATTTGTCGTTGCGAAAATTGATGAACCACGATTTGAACGTGAGGGCCTACTTATTGAGGGGCAAAGAACGAACTATATTCTTAACTCGCTTACTGTTTCTAAATGGGGTGCATCTTCGTGGTTGACAATTTCATCAAGCGGAGTTGATAGCTTTGGTTTTACATATGGTCGATTTGATGTTCAGTCTAGTAATGTTGGAAGCACAACATCCGGTAATATTGCCGTGGCTCCTTCACCAAGAGCATTTGACGTTACTGGTGGTGAGAAGTATTGCACTATATCTTGCCGATGCAAATGTGAATCAGACATAGATATTCGATGCAGACTCCGATTTGAGAACTACGACGGGACTGCCACATCCTTCATTGGCGATGCGTACATGAATATGCAGACTTTAGATATAACAACTACAGGTGGCGCGGCAAATAGAATTACAGCTAAAGCGGTCAAGGATAATGCTACAGGATGGATATTTTTTGAAGCGACAATAAAAGCACTAGATACCGAAAATATGATTGGTGGCCAAGTTCAGATAGCACCATCTCAAAGAGTTGGTTCTTTTGCAGATGGTGATCATATTATTGTTGCAACGCCGCAATTCGAAGGTGGGGCGACTGCATCGTCATTCATCATATCTGATACAGTTGCAGCAACACGCGCAAGCGACACGGTAACTGTTCCTATAAAGAATAATATTTACTCCATTCCTTTCACAATACTGTGTGAAGTACATAAGAACTGGTATAAAACGCCAAATGCAGCGCCACGTGTTTTTGATACCAGCGGTTATCAAACCGGAGCGGCTATTATTCTTGGCTTCGGTCGTTCAACAGATTACGACGGATTTCCTTATTGCGATATTGGAAGAGCTAACATCCGGGTAAACGAAAACGCATCGCTTGAAAAAATGGTTATGGGGATGCGTGTAAAAGCAGATCAATTGACATGTGCAATAAGTAACGGACGTATATCCAGCGAAACAAAAACAACCTGGACTTATATTCAAAGCTCCGCAACTATTCGTATCGGTGGTCAGACAACGACAGGACAACGTCATTTATTTGGTCATGTCAGAAATTTTCGAGTATGGCATAAAGCATTGACTGACCGTGAATTGAAGGAGTCTGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
afe3ddc317e76dd33ef4720193e9ea951e2b4b1b287f31db7efb63a9c590c06f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7741
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic Discovery of Phage Genes that Inactivate Bacterial Immune Systems Ojima,S., Azam,A.H., Kondo,K., Nie,W., Wang,S., Chihara,K., Tamura,A., Yamashita,W., Nakamura,T., Sugawara,Y., Sugai,M., Zhu,B., Takahashi,Y., Watashi,K. and Kiga,K. 2024 — GenBank