Protein

View in Explore
Genbank accession
UZV39836.1 [GenBank]
Protein name
L-shaped tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MADLTPKAFDGMVLQLSATPLKGNPGEQGKGVKGDTGPSNYQLWLQAGNTGSLNDFLLSIKGEAGEDGKGLTNQGDWAPGFYSPNDYVFSLNAEGNTAMYIALGSEDFLSEQLPKDDATNWVEFSSPKGTPGTDGTNGAKWFIEPTLPDDAVGVNGDCYLNINSGNVYQKENDTWGIPKGSLLVETGQAEVPPMIARPDVTTIVDGTMGNTYSRFTNAAAKTFQFTTTAALAVNTEFHGRNVGAGALTLVAGAGFTLYPPAGGSLIIPQGGTFTVKIIAANEADVIGVTEAP
Physico‐chemical
properties
protein length:292 AA
molecular weight: 30468,46520 Da
isoelectric point:4,28898
aromaticity:0,08904
hydropathy:-0,21473

Domains

Domains [InterPro]
DC_0914
STR
5–292
DC_0914
UZV39836.1
1 292
Architecture
STR
STR 5-292
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas virus PB119
[NCBI] 		2995629 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas euvesicatoria
[NCBI] 		456327 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UZV39836.1 [NCBI]
Genbank nucleotide accession
OP562166.1 [NCBI]
CDS location
range 33554 -> 34432
strand +
CDS
ATGGCTGATCTGACTCCTAAGGCTTTCGACGGCATGGTGTTGCAGCTCTCTGCAACTCCGTTGAAGGGCAACCCCGGCGAACAAGGCAAGGGTGTGAAGGGCGATACTGGACCGTCCAACTATCAGTTGTGGCTGCAAGCTGGCAATACCGGTTCGCTCAACGACTTCCTGCTGTCGATCAAGGGTGAAGCTGGTGAAGATGGCAAGGGTCTGACCAATCAAGGTGATTGGGCACCCGGCTTCTACAGCCCGAATGACTACGTGTTCTCGCTCAATGCCGAAGGCAACACGGCGATGTATATTGCCCTCGGCTCCGAAGATTTCCTGTCGGAACAGTTGCCGAAGGATGACGCGACGAACTGGGTGGAATTCTCCAGTCCGAAGGGTACTCCCGGTACCGATGGCACCAACGGTGCCAAGTGGTTCATCGAACCCACGCTCCCCGATGATGCCGTAGGCGTCAACGGCGACTGCTACCTCAACATCAATTCTGGCAACGTCTACCAGAAAGAGAATGACACGTGGGGTATCCCCAAGGGTTCTCTGCTGGTTGAGACCGGTCAGGCTGAAGTTCCTCCGATGATTGCACGTCCTGACGTGACCACTATCGTGGATGGAACCATGGGGAATACTTACAGCCGGTTCACCAATGCGGCTGCGAAGACTTTCCAGTTCACCACGACTGCTGCTCTGGCAGTGAACACCGAATTCCACGGTCGTAACGTGGGTGCCGGTGCACTGACTCTGGTGGCCGGTGCAGGCTTCACTCTGTATCCGCCTGCCGGTGGTTCGTTGATCATCCCGCAGGGTGGCACGTTCACCGTCAAGATCATTGCTGCCAATGAGGCAGACGTGATTGGTGTCACGGAGGCTCCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ce8c19b2f4c7211ab80e5d60e91ea7cc1bb40d3e1fed30e5f3939c585bcf4729
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8275
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of novel bacteriophages useful for control of diseases caused by X. euvesicatoria Petrzik,K. and Brazdova,S. 2015-04-10 — GenBank