Protein

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Genbank accession
ATE85543.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MNFVVNNIPDGVPVRVFIDEIGEDNDVTEDFEALKEDAIFHVVESAGGGAIKGVMKIFSVVLKPLAKLLSPSVKGASSNLANSQADSPNNSLSDRNNKARPYERSYDICGTVQTIPNNLMSTYKVFNAAGRIIEYGYYDAGRGYLDIHPDGITDGDTRVSDITGTSVAVYAPYTSPNNTATPQVLVGDPIEQGLYLTVESNEVDGVVLKAQNGLGISFSYMSGYPSLSGSTGTIYDPSGGSDFSGVLVPNDTFSLVSTWTNTDVDLSGGGYQVISVSEGTVTFVVPGNLISKWQQIQPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGRSKTLASVTAEIQYQLLDENSVPYGQIYTAQGTVSGRTSDYNGVTIYADLPVASRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTMIATEMVYKYLGNGVFEDTMSPNTQAVQSLIRLARDPDVGGLDLTVRNMDKLLAVQKEIEDYFGDKQAGEFCYTFDDYKTTMQDIVNTIADAIFCTPYRRGADILLDFERPRIGPEMVFTHRSKAGTSEKWTRTFNDAQVFDSLKFSYIDPKTNTKEVITIPETGGLKTETYDSKGIRNYKQAFWAANRRHQKNTLKKISVSFSATEEGIFALPNRAISVVKGSRMSTYDGYITAVNGLTVELSQPVKFTSGDDHSLVLKRRDGGVQSVKVTPGAHDRQVIMVEVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSDGFDSGFN
Physico‐chemical
properties
protein length:796 AA
molecular weight: 87333,31880 Da
isoelectric point:4,84606
aromaticity:0,09925
hydropathy:-0,32148

Domains

Domains [InterPro]
DC_0118
STR
1–630
DC_0118 DC_0808
NF040662
Unmapped
437–776
NF040662
ATE85543.1
1 796
Architecture
STR
RBD
STR 1-630 | RBD 647-789 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATE85543.1
1 796
Domain Start End Length (AA) Confidence
N-terminal 1 203 203 0,9776
Central domain 204 402 200 0,6698
C-terminal 403 796 393 0,1375
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-203
Central
204-402
C-terminal
403-796

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage St161
[NCBI] 		2024311 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica sv.
[NCBI] 		2846078 Duplornaviricota > Chrymotiviricetes > Ghabrivirales > Chrysoviridae > Alphachrysovirus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATE85543.1 [NCBI]
Genbank nucleotide accession
MF158036 [NCBI]
CDS location
range 4009 -> 6399
strand -
CDS
ATGAACTTCGTTGTCAATAATATACCGGATGGTGTGCCGGTGCGCGTCTTTATCGATGAGATAGGCGAAGACAACGATGTTACTGAGGATTTCGAAGCATTGAAAGAAGACGCAATCTTTCATGTTGTTGAGTCCGCGGGTGGCGGAGCTATTAAAGGTGTCATGAAGATTTTCAGTGTAGTTTTAAAACCACTGGCGAAGCTTTTGTCCCCTTCAGTAAAAGGTGCGTCGTCAAACCTCGCTAACTCGCAAGCAGACTCGCCCAACAACAGTCTTTCAGACCGCAATAATAAAGCGCGTCCCTATGAGCGTAGCTATGACATTTGTGGGACGGTGCAAACGATACCAAACAACCTTATGTCAACTTATAAGGTGTTTAACGCAGCGGGTCGCATTATAGAATATGGATACTACGATGCCGGTAGAGGTTATCTTGACATACACCCTGACGGAATAACAGACGGTGATACCCGTGTATCTGACATCACAGGGACATCAGTTGCCGTCTATGCGCCGTACACGTCGCCGAATAACACGGCAACGCCGCAAGTACTGGTTGGAGACCCTATAGAGCAGGGGTTATATCTGACCGTCGAATCTAACGAAGTAGATGGCGTGGTTCTGAAAGCGCAAAACGGACTTGGCATCTCGTTTTCTTACATGTCTGGATACCCTTCGTTATCCGGTTCCACCGGCACGATATACGACCCGTCAGGAGGGTCTGACTTCTCCGGTGTTCTTGTGCCGAATGATACGTTTTCTCTCGTATCCACCTGGACAAATACAGATGTTGACCTTTCCGGTGGCGGCTATCAGGTAATAAGTGTTTCCGAAGGAACTGTTACTTTCGTAGTCCCCGGTAATCTTATAAGTAAATGGCAACAAATACAGCCAGGTTCATTTTTCCGGGGAGATGGCGAAGCATCATTGCAACCGGACAACACCTATGAAAAAACGTTAACTGATTGGGTGTCCATAAACCGAACTGAGGTGGAACGTATTGTCGCTAACATAGCTGCTGCAAACGGGATGTACAAAGACAATGGTAGGTCTAAAACGTTGGCTTCGGTAACGGCTGAAATACAATACCAACTTCTTGACGAAAATAGCGTACCTTACGGCCAAATTTACACGGCGCAAGGAACCGTATCCGGGCGCACTTCTGACTATAACGGGGTGACTATATACGCAGATTTACCAGTAGCATCTCGTGTTCGCGTCAGGGCAAGAAGGGTAACAGACCTTGATTTCAATTTCGAAGGCTCAGTGGTAGACGAAATAACCTACGTTAACCTGTACGGGCAGACTATGATTGCGACCGAGATGGTGTATAAATATCTCGGGAATGGAGTGTTTGAGGATACGATGTCACCTAACACCCAAGCAGTTCAATCGTTGATTCGCCTCGCCAGGGACCCGGACGTCGGGGGGCTTGACTTAACAGTAAGGAATATGGATAAGTTGCTTGCTGTTCAAAAGGAAATAGAGGACTACTTCGGCGACAAGCAAGCAGGAGAATTCTGTTACACCTTTGACGATTATAAAACAACAATGCAGGATATCGTCAACACTATTGCCGATGCTATTTTTTGCACGCCATACCGTAGAGGCGCTGACATTCTGCTTGACTTCGAGAGGCCTCGTATTGGGCCTGAAATGGTATTTACCCACCGCAGCAAGGCGGGAACCTCCGAAAAATGGACAAGAACTTTCAATGATGCACAGGTTTTTGACAGTTTAAAATTCTCTTACATAGACCCAAAAACTAACACTAAAGAGGTGATAACAATCCCGGAAACTGGCGGTTTGAAGACTGAAACGTACGATTCGAAGGGGATACGCAACTATAAGCAGGCTTTCTGGGCTGCAAACAGACGGCACCAGAAAAACACTCTTAAGAAGATTTCGGTATCGTTTAGTGCCACGGAAGAGGGGATATTTGCGCTACCAAACAGGGCTATTAGCGTAGTGAAAGGCTCCCGGATGTCTACCTATGACGGCTACATAACGGCGGTAAACGGCCTAACTGTGGAGCTGTCACAGCCCGTTAAATTTACGTCCGGAGACGACCACTCTCTTGTTCTCAAGCGGCGAGACGGCGGCGTCCAAAGCGTCAAAGTCACGCCAGGGGCACACGACAGGCAGGTGATTATGGTGGAAGTCCCTCAAGAGGCAATATACACCGGCAACAGCGCTTTAAAAACTGAGTTTTCATTTGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGACGACCGAACAGTTAAAATAACAGGGTTTAACTACGACAAGGACTTCTACAAATTTGATAATGTGCCGCCTTTTGGTCGCGCATTCTCGGATGGGTTCGATAGCGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
941fb664b2ca22d356c2e16a929d36b5be538eeddf6b97a5ac474d4c9fffa392
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3017
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The isolation and characterization of 16 novel Shigella-infecting phages from the environment Doore,S.M., Schrad,J.R., Dover,J.A. and Parent,K.N. 2020-09-29 — GenBank