Protein

View in Explore
Genbank accession
AFB15316.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSTLNVGTVNSTTLNLGVGGIVFNDATSITTAPGAPALGDVTNVTITTPAPDDILIWNGSQWVNQAPEGGIGLGNVASRPSSNLTNTIRWNTETEVLETYLDHNNNGSVAAWHAVGGRQLIAKAMRKDQWGSMDIYWGQTAGRNSGRYYAYEIFMNFYEQNGNNAEYYLRLMTGNGTIDSGRNYYYSVQSHHINDGFPRNNENGQRYIRIVNRDDSYDLRSNGESTYLCHFLLSNTPNSSTANYWSFSYNCAGHSGQGGGYLRGGGSWRHPGPAEGNAYPCNGIRIYNNQAQRPVTSGVNVCISVFGISGQEGREMLDNYGQP
Physico‐chemical
properties
protein length:323 AA
molecular weight: 35333,22400 Da
isoelectric point:5,78197
aromaticity:0,10836
hydropathy:-0,56718

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIM8 A.HR5
[NCBI] 		869726 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFB15316.1 [NCBI]
Genbank nucleotide accession
HQ317385.1 [NCBI]
CDS location
range 27937 -> 28908
strand +
CDS
ATGTCAACTCTTAATGTAGGAACAGTAAATTCAACGACTCTCAATTTGGGAGTTGGTGGTATTGTGTTTAATGATGCTACTAGCATCACTACTGCTCCTGGAGCACCAGCATTGGGTGATGTTACTAACGTAACTATTACTACTCCAGCACCAGACGATATTTTAATTTGGAATGGTAGTCAATGGGTGAACCAAGCACCTGAGGGAGGAATTGGTCTCGGTAATGTTGCTTCAAGACCATCTAGCAACCTGACTAATACAATTAGATGGAATACTGAGACTGAAGTATTAGAAACCTATCTTGACCATAATAATAATGGCAGCGTTGCTGCATGGCACGCTGTCGGTGGAAGACAGTTGATTGCTAAAGCAATGCGAAAAGATCAGTGGGGCAGCATGGATATTTACTGGGGTCAAACCGCTGGCAGAAACAGTGGTAGATATTATGCTTATGAAATTTTTATGAATTTCTACGAGCAAAATGGTAACAACGCAGAATATTATTTGCGTTTGATGACAGGTAATGGTACTATTGACAGTGGTCGTAACTACTATTATTCTGTTCAGTCACATCATATTAACGACGGATTCCCAAGAAACAACGAAAATGGTCAGAGATATATTAGAATTGTAAACCGTGACGATAGTTATGACCTTCGTAGTAACGGTGAGTCTACCTATCTGTGTCACTTCTTATTGTCGAATACTCCTAACTCCAGTACAGCAAACTATTGGTCGTTTAGTTACAACTGTGCTGGTCACTCTGGACAGGGCGGCGGATACTTAAGGGGTGGCGGTTCTTGGAGACATCCTGGACCTGCTGAAGGTAATGCATACCCTTGCAATGGTATCCGAATTTATAACAACCAGGCCCAGAGACCAGTTACGTCAGGCGTCAACGTCTGTATATCCGTATTTGGTATCTCAGGTCAAGAAGGTAGAGAAATGCTCGACAATTATGGACAACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9ec975d1f0ecb3a88b7daddbc7986eb0b72249aba3dfdf288a3fc1781c3aed3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6954
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-RIM8 isolate A.HR5 Henn,M.R., Martiny,J., Weihe,C., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank