Protein

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Genbank accession
XWX32526.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MAKNLLLYDKYNKVINTTMDVKGTTGYITIENLIPDTDYPEGEFYVGWEVEGKVLPKATVPEFTTLRQMREKVVIVYFSDLTEKQLVDIKGDSAYKIALDNGFKGSQEEWLKSLKGEPGEPGKQGEPGKNGVDITEGGSAYEIALAEGFQGTRGEWLESLKGEPGEPGEKGDPGEDGFGVDGASAYEIALENGFIGNIQDFLDSLKGKPGREGQDGNDGLSAYEIALENGFIGTEQEWIKSLKGDPGDPGEKGEPGEDGQDVYTTVYTMSVDMNTPFTGKKLFISYNQLMVTIMIQGNADATVDNIKDTDTLIAKLPDNVPLPKTQFARGTITSMTGGETVQYVGNIFIDSNRNIYLKFNKKGSEVRSYFGGSFSYPTGESVVNFNQGIIKSFEFDNPSFLSMQGTDYYDNYIFSGINEIKGDIQHIKYINTLDSQDKGTLTNTDANFSELVGHANSMKVLGKIGEEILVYVVKTDTPDIVPVYINMANKTTRVGEGVITITDENSSVKRIISINSIKKVNDEYIFDVYWYGINFAFKINQLDLDKKMTVSSKRSFSISEDELFKIRKDKIGDFGDNVRITQGTRIYDDYFYLTQYRGVTSSVFKFKIEESGKLTYISHWVLQKGNLDRFEIQDVFKINDGIYVSLSEGSIDGRYNNYIAKIEI
Physico‐chemical
properties
protein length:664 AA
molecular weight: 73963,93840 Da
isoelectric point:4,68299
aromaticity:0,10994
hydropathy:-0,44352

Domains

Domains [InterPro]
DC_0108
STR
4–136
DC_0108 DC_2121
IPR050149
Unmapped
115–259
IPR050149
DC_2121
ATT
122–180
DC_2121 DC_0108
XWX32526.1
1 664
Architecture
STR
ATT
STR
STR 4-121 | ATT 122-219 | STR 220-658 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XWX32526.1
1 664
Domain Start End Length (AA) Confidence
N-terminal 1 408 408 0,7260
Central domain 409 607 200 0,6377
C-terminal 608 664 56 0,2630
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-408
Central
409-607
C-terminal
608-664

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_31
[NCBI] 		2815623 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus vitulinus
[NCBI] 		71237 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX32526.1 [NCBI]
Genbank nucleotide accession
MZ417329 [NCBI]
CDS location
range 65627 -> 67621
strand +
CDS
ATGGCTAAAAATTTACTACTATATGATAAGTATAATAAAGTAATAAATACCACAATGGATGTTAAAGGTACTACGGGATATATAACAATAGAAAATCTTATTCCAGATACTGACTATCCAGAAGGTGAATTCTACGTAGGATGGGAAGTAGAAGGCAAAGTACTGCCTAAAGCTACCGTACCAGAATTTACTACACTAAGACAGATGAGAGAAAAAGTAGTAATTGTCTATTTTAGTGATTTAACAGAAAAACAATTAGTAGATATAAAAGGTGATAGTGCATATAAAATAGCACTAGATAATGGATTTAAAGGTTCACAAGAAGAATGGCTTAAAAGCCTTAAAGGAGAGCCTGGTGAACCTGGTAAACAAGGGGAACCCGGTAAGAATGGCGTAGATATTACCGAAGGAGGCTCTGCTTATGAAATAGCTTTAGCAGAGGGTTTTCAAGGAACTAGAGGAGAATGGCTAGAGTCACTTAAAGGAGAACCCGGAGAACCGGGTGAGAAAGGTGACCCCGGTGAAGATGGTTTTGGTGTAGATGGTGCCAGTGCTTATGAGATAGCCTTAGAAAATGGTTTCATAGGTAACATTCAAGATTTCTTAGATAGCTTAAAAGGTAAACCGGGTAGAGAGGGTCAAGATGGTAATGATGGGTTATCTGCTTATGAGATAGCCTTAGAAAATGGTTTCATAGGTACAGAGCAAGAATGGATTAAAAGCCTTAAAGGTGACCCCGGTGACCCAGGTGAGAAAGGAGAACCAGGTGAAGATGGTCAAGACGTTTATACAACGGTTTATACCATGAGTGTTGATATGAATACCCCTTTTACAGGAAAGAAACTTTTTATATCTTATAATCAATTAATGGTTACAATAATGATACAAGGTAATGCAGATGCTACCGTTGATAACATAAAAGATACGGATACTTTAATAGCTAAGTTACCAGATAATGTACCGTTGCCTAAAACACAGTTTGCAAGAGGAACTATTACAAGTATGACAGGTGGGGAAACTGTTCAATATGTAGGTAATATTTTTATAGACAGTAATAGAAACATATACCTTAAATTTAATAAAAAAGGTAGTGAAGTTAGAAGTTATTTTGGGGGTTCTTTCAGTTACCCTACTGGAGAAAGTGTTGTAAATTTTAATCAAGGGATTATTAAATCTTTTGAGTTTGATAATCCCTCTTTCTTATCTATGCAAGGAACAGATTATTATGATAACTATATCTTTTCCGGGATAAATGAGATAAAAGGAGATATCCAACATATAAAATATATTAATACGTTAGATAGTCAAGATAAAGGAACTTTAACTAATACAGATGCTAATTTTAGTGAATTAGTAGGACATGCTAATAGTATGAAAGTATTAGGGAAAATAGGAGAAGAAATATTAGTATATGTTGTCAAAACTGATACCCCAGATATAGTTCCGGTGTATATAAACATGGCAAATAAAACAACTAGAGTTGGTGAAGGTGTTATAACTATTACCGATGAAAACTCTTCTGTTAAAAGAATAATATCTATAAATTCTATAAAAAAAGTAAATGATGAATATATTTTTGATGTTTATTGGTATGGTATTAACTTTGCCTTTAAAATAAATCAATTAGACTTAGATAAAAAAATGACTGTTTCTAGTAAAAGAAGCTTTAGCATTTCTGAAGATGAGTTATTTAAAATAAGAAAAGATAAAATAGGAGATTTTGGTGACAATGTAAGAATAACACAAGGAACTCGTATATATGATGACTATTTTTATTTAACTCAATATAGAGGGGTAACATCTTCTGTTTTTAAATTTAAAATAGAAGAGTCTGGTAAGTTAACATATATTTCTCATTGGGTTCTACAAAAAGGAAACCTTGATAGATTCGAAATACAAGATGTGTTTAAAATAAATGATGGTATATATGTATCATTATCCGAAGGGTCTATTGATGGTAGATATAATAACTATATAGCTAAAATAGAAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4e564c67e4edf55f6c64f43b43d80d80997f4d5060da3d6c8071262bc166d153
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7557
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank