Protein

View in Explore
Genbank accession
WPK20487.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MKIAPNMGLSYGWVRGEDFWGGPMNETLTTLDTVTFLRLQSITFSAPPADAKNGDTYFIYKNPTGPWVGQERKLAVLIEGVWQFIEPKRGWRAFLDPTNEFIWWDGETWRIENTGVDPIDPNPSPDVVPMAFDISATISEKMYPSEVLVHLPIIDNMYLPANMAQSQFDARSAFLDKAKFTVQRNNQTVGTFTVDRGQYNATFVTSGSVAVRFFKGDRLTILAPVDTIDSAVNFGFIIRLMIQGA
Physico‐chemical
properties
protein length:245 AA
molecular weight: 27516,98790 Da
isoelectric point:4,86527
aromaticity:0,12653
hydropathy:-0,13265

Domains

Domains [InterPro]
DC_0494
STR
1–245
DC_0494
IPR021251
STR
25–110
IPR021251
WPK20487.1
1 245
Architecture
STR
STR 1-245
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SD-14_S20
[NCBI] 		3096170 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK20487.1 [NCBI]
Genbank nucleotide accession
OR699187.1 [NCBI]
CDS location
range 24316 -> 25053
strand -
CDS
ATGAAAATTGCCCCTAACATGGGGCTTTCCTATGGTTGGGTGAGAGGCGAGGATTTTTGGGGTGGCCCAATGAACGAGACGCTAACCACCTTAGATACTGTTACGTTTCTACGCCTACAATCTATCACGTTTAGTGCGCCACCGGCTGACGCTAAAAACGGCGACACCTATTTTATCTATAAAAACCCGACCGGCCCTTGGGTTGGCCAAGAAAGAAAACTAGCCGTGTTGATCGAAGGCGTGTGGCAATTCATCGAGCCTAAACGTGGGTGGAGGGCATTCTTAGACCCGACCAATGAGTTTATCTGGTGGGACGGTGAGACATGGCGCATCGAGAATACCGGGGTTGACCCTATCGACCCTAACCCATCTCCTGATGTTGTTCCTATGGCGTTCGATATATCTGCGACAATATCCGAGAAGATGTATCCATCAGAAGTGCTCGTACACTTGCCGATCATCGACAACATGTATCTACCGGCTAACATGGCACAATCACAATTCGACGCCCGCAGTGCTTTTCTCGATAAAGCTAAGTTCACTGTGCAGAGAAATAACCAAACTGTCGGCACATTCACTGTCGATCGGGGGCAATATAACGCCACTTTCGTGACGTCCGGTAGCGTTGCCGTGAGATTTTTCAAAGGTGACAGGCTGACAATCTTAGCTCCGGTTGATACAATCGACTCGGCCGTTAACTTCGGCTTTATTATTAGACTAATGATTCAGGGGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7ffba5d25274fadd7a67baaf382e3da2c9fb8aae84be4f8cb7c4a61b70432217
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8691
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence a group of lytic Salmonella phages Dlamini,S.B., Montso,P.K., Ateba,C.N., Mnisi,M.C. and Mlambo,V. 2023-09 — GenBank