Protein

View in Explore
Genbank accession
XYR96017.1 [GenBank]
Protein name
tail fiber-like protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,60
TF
Evidence RBPdetect2
Probability 0,76
Protein sequence
MSRARNLAGFGSAVTNPQNPVNVRLGVVTAIEYYGDGSNLTGTPGGLGTSLLPDDLNSPLNKIYYTDANLTIGSTITVDPPASASAAYTQYTNIVLQGDADLIVADGDDFIPDILGIGTDVDTPGILASGEGKVRVDNITDKSGVKAPKFPYGLAVPVGAAVSVGYGTEATPGLVGVDTTTGVFFPAAGQVAISAGGTEALRVTTAGNIGIGTDIPVSSAGYANLSLANISGGQIELKKLADDRIHYIWGDDHLNIAGAYSGSPSGEIKFYTNGNNERLSITNGGNINVSTGSTLQLGDSSITQNQVYRYEEIAGGAIKKYYVSDTLNSGQLTRFTFVGTDRTSAMITINATGSWTASNTSNNHPAAQFMCRVFTNSSGTSSDSATVTTPFAYTYSAASHYAFNNSGGNGYSIDISNPTADDGVSFFYEVIIQNAVPGSQHSMTASSTA
Physico‐chemical
properties
protein length:449 AA
molecular weight: 46320,35480 Da
isoelectric point:4,49906
aromaticity:0,08241
hydropathy:-0,08708

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR96017.1
1 449
Domain Start End Length (AA) Confidence
N-terminal 1 70 70 0,7402
Central domain 71 269 200 0,3326
C-terminal 270 449 179 0,9877
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-70
Central
71-269
C-terminal
270-449

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage RB11-B
[NCBI] 		3412546 Viruses >
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR96017.1 [NCBI]
Genbank nucleotide accession
PV261925.1 [NCBI]
CDS location
range 184225 -> 185574
strand -
CDS
ATGTCAAGAGCTCGTAATCTTGCTGGTTTTGGTTCTGCGGTTACTAACCCTCAAAATCCTGTTAATGTCAGGTTGGGGGTAGTAACTGCAATTGAATACTATGGTGACGGCTCAAACCTGACTGGTACTCCTGGTGGCCTTGGTACTTCATTGTTACCAGATGACCTAAACAGTCCGTTGAATAAGATATATTATACTGATGCAAACCTGACCATTGGTTCTACCATCACTGTAGACCCACCAGCATCTGCTTCAGCAGCATATACACAATATACCAACATTGTCCTACAAGGTGATGCAGACCTGATTGTAGCCGATGGTGATGACTTTATTCCTGACATTTTAGGTATTGGTACAGATGTAGATACTCCTGGTATTCTTGCTAGTGGTGAAGGTAAAGTAAGAGTAGATAATATTACAGATAAGAGTGGTGTAAAGGCACCTAAGTTCCCTTATGGTCTTGCAGTTCCTGTTGGTGCAGCAGTATCAGTTGGTTATGGTACAGAAGCAACACCTGGTTTAGTTGGTGTTGATACAACGACTGGCGTATTCTTCCCTGCTGCTGGTCAAGTTGCAATATCTGCTGGTGGAACTGAGGCACTCAGAGTTACTACAGCCGGCAATATTGGTATTGGAACTGACATACCAGTTTCATCAGCTGGTTACGCAAATCTTTCTCTTGCCAATATTAGTGGTGGACAGATTGAATTAAAAAAACTTGCTGATGATAGAATTCATTACATTTGGGGTGATGATCATTTAAATATAGCAGGTGCTTATTCAGGCTCACCTTCAGGAGAAATCAAATTCTATACAAATGGAAATAATGAAAGACTAAGCATCACTAATGGTGGTAACATCAATGTATCAACTGGTTCCACTTTACAGTTAGGCGATAGTTCTATTACACAAAACCAAGTCTATAGATATGAGGAGATTGCTGGTGGTGCAATCAAAAAGTATTATGTCAGTGATACATTGAATTCTGGACAACTGACTAGATTTACTTTTGTAGGAACTGATAGAACTAGTGCAATGATTACAATCAATGCTACAGGTTCTTGGACAGCATCTAATACATCAAACAATCACCCTGCTGCACAGTTTATGTGTAGAGTATTTACAAACTCCAGTGGTACATCCTCTGATAGTGCAACAGTAACCACACCTTTTGCATATACTTACTCAGCAGCAAGTCACTATGCATTTAATAATTCTGGCGGAAATGGATATAGTATTGATATTTCTAATCCAACAGCTGATGATGGTGTGTCATTCTTCTATGAAGTCATTATTCAAAATGCAGTACCAGGTTCACAGCACTCAATGACCGCTTCATCCACTGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d61eef5445b72ff1906175f13d4f3cdfec8f305489ba5f18535016aa4b32b274
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7264
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50