Protein

View in Explore
Genbank accession
QLF85809.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MALVIHYTRNEDGTFDVKRYRDNPMNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKENATFHIVESAGGGAIKGVMKIFSVILKPLAKLLSPSVKGATSNLANSQANSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMTTYKVFNAAGKIVEYGYYDAGRGYFDIHPEGITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPNDTFSLVAAWTNTDVDLSGGGYQVLSVSEGTVTFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNPYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLASVTAEIQYQLLDENSTPYGPIYTAQGTVSGRTPDYNGVTIYADLPVVSRVRVRARRVTDLDFNFEGSVVDEITYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVYKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVHNMDKLLAVQNEVEAYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDAQVFDSLKFSYIDPKTNVKETITIPETGGLKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFTATEEGIFALPNRAISVVKGSRMATYDGYITAVNGLTVELSQPVKFTSGDDHSLVLKLRDGGVQSVRVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFRSCVL
Physico‐chemical
properties
protein length:844 AA
molecular weight: 93091,22900 Da
isoelectric point:5,35568
aromaticity:0,09597
hydropathy:-0,34988

Domains

Domains [InterPro]
DC_0118
STR
1–686
DC_0118 DC_0808
NF040662
Unmapped
352–832
NF040662
QLF85809.1
1 844
Architecture
STR
RBD
STR 1-686 | RBD 703-842 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLF85809.1
1 844
Domain Start End Length (AA) Confidence
N-terminal 1 231 231 0,9662
Central domain 232 430 200 0,6283
C-terminal 431 844 413 0,1753
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-231
Central
232-430
C-terminal
431-844

Taxonomy

  Name Taxonomy ID Lineage
Phage Jerseyvirus jersey
[NCBI] 		2005696 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLF85809.1 [NCBI]
Genbank nucleotide accession
MT588083 [NCBI]
CDS location
range 9820 -> 12354
strand +
CDS
TTGGCGCTAGTAATCCACTACACACGAAACGAAGACGGCACGTTTGATGTCAAGCGCTACCGCGATAACCCGATGAACTTCGTCGTGAACCATGTTCCGGACGGGGTGCCGGTGCGTGTTTTCATTGACGAAATCGGAGAAGATAACGACGTAACAGAAGACTTCGAAGCACTGAAAGAAAACGCGACTTTCCACATTGTGGAATCTGCCGGTGGTGGCGCTATTAAAGGCGTCATGAAGATTTTTAGCGTTATTCTTAAACCGTTGGCGAAGCTCTTGTCGCCGTCCGTGAAAGGTGCGACCTCTAACCTTGCGAACTCGCAGGCAAATTCCCCAAACAACAGTCTTACTGACCGCAACAACAAGGCGCGTCCGTACGAGCGCAGCTACGATATCTGCGGGACGGTGCAAACCATCCCCAATAACCTTATGACTACTTACAAGGTGTTTAACGCCGCCGGTAAAATTGTAGAGTACGGTTATTACGACGCCGGTCGCGGCTACTTCGACATCCACCCTGAAGGTATAACTGACGGGGACACCCGCGTATCAGACATAACAGGTACGTCGGTTGCCGTGTATGCCCCGTACACATCTCCCAATAACACATCTACACCCCAGGTCATGGTAGGGGACCCCATAGAGCAGGGCCTGTACATCACCGTAGAATCTAACGAAGTAGACGGCGTGGTTCTTAAAGCGCCAAACGGTCTGGGTATTTCTTTCTCTTACATGTCCGGGTATCCGTCTTTGTCCGGAAACATTGGCACGATATATGACCCAACAGGTGGTTCGGATTTTTCTGGAGTGTTGGTGCCTAATGACACGTTTTCGTTGGTGGCAGCGTGGACAAATACGGACGTCGACTTGTCCGGCGGCGGGTATCAGGTGTTAAGCGTATCCGAAGGGACCGTTACCTTTATCGTGCCTGGCGGCCTTATCGGGCGGTGGCAAGAAATAAGACCCGGTTCATTTTTCCGCGGTGATGGAGAGGCCTCGCTGCAACCAGACAACCCGTATGAGAAAACATTAACCGATTGGGTTTCAATAAACCGTACCGAGGTTGAGCGTATAGTCGCCAATATCGCTGCTGCCAATGGCATGTATAAAGACAACGGCAAGTCAAAAACACTGGCATCCGTTACCGCTGAGATACAGTACCAGCTACTTGATGAAAATAGCACCCCTTATGGGCCGATATACACTGCACAAGGAACCGTGTCCGGGCGAACCCCAGACTACAACGGTGTCACTATTTACGCCGACCTGCCGGTTGTGTCGCGGGTGCGGGTGCGCGCCAGAAGGGTGACAGACCTCGACTTTAATTTCGAGGGGTCTGTAGTTGATGAGATAACGTACGTTAACTTGTACGGGCAAACACGCGATAACACTCCGCACTACGGCAACAGAACTACTGTACACTCGATGCGCAAGCAGACACCGCGTGCTGCAGAAGTTAAGCAACCACAGTTGCGCATGATTGCGACCGAAATGGTATACAAATACCTTGGTAACGGTGTTTTCGAAGATACGATGACTCCCAATACCCAGGCCGTGCAATCTCTCATCCGCCTGGCACGTGACCCGGATGTGGGGGGTTTAAACCTGACGGTACACAACATGGATAAGTTACTTGCCGTGCAGAACGAGGTCGAAGCGTATTTCGGCGACAAACAGGCGGGGGAATTTTGCTACACGTTTGATGACTATAAAACCACTATGCAGGACATAGTTAGTACTATAGCCGACGCTATCTTCTGTACTCCATACAGGCGTGGGGCGGATATCCTTCTCGATTTTGAGCGCCCTCGCATGGGCCCCGAGATGGTGTTCACCCACCGAAGCAAGGCCGGTACTTCTGAAAAGTGGACCAGAACCTTTAACGATGCTCAGGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCTAAGACGAACGTCAAAGAGACTATAACCATACCCGAAACCGGGGGCCTTAAAACGGAGACTTACGACTCAAAAGGAATCCGCAACTATAAGCAGGCTTTCTGGGCGGCAAACCGTCGCCACCAGAAGAACATTTTAAAGAAAATTTCAGTGTCGTTTACCGCCACGGAAGAGGGTATCTTTGCTTTACCAAATCGTGCCATTAGTGTCGTTAAGGGCTCACGTATGGCTACCTACGATGGCTACATAACCGCAGTAAACGGCCTCACCGTAGAGCTTTCGCAGCCAGTTAAGTTCACCTCCGGGGATGACCATTCTTTGGTTCTTAAGCTGAGAGATGGCGGCGTCCAAAGTGTTCGCGTTGTCCCTGGTGCACACGACCGACAAGTAATTATGACTTCTGTACCGCAGGAAGCCATTTACACGGGTAATAGCGCCCTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGACCCTGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTGCCTCCTTTTCGGTCGTGCGTTCTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e625f7e913f3e5c88bf22582fc4c795809e297368595dcf4e393a839ee7425da
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3012
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and functional characterization of five novel Salmonella-targeting bacteriophages Kuzminska-Bajor,M., Sliwka,P., Ugorski,M., Korzeniowski,P., Skaradzinska,A., Kuczkowski,M., Narajaczyk,M., Wieliczko,A. and Kolenda,R. 2021 34496915 GenBank