Protein

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Genbank accession
QBX27508.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MEILNTLNLTRISGGTKLKQGDFGSVLSYSLADENGQEITSFDTKTAYINLVLDDKILFTTTTQVDISRVTFHIDKAIPTGLYYLEIKIDDYVFPSDKDSVILIEEGATAYDLKDLIPNYDVVMTITTILSDLAQKGMNITDLQTKVNAIYSNALSDHAEIIQARGGQSSLDSRLDGLDAKDSSLQAQIISNDADIDSTNTRINNLVANAGNGTVPSEVIEMRTGDDGFSYTTASEAVKHTGTIVENSFKVPITLTAGYYIVSANGTYALHSNQAYKATDFIDITGASIIKLDTAFSVASDGYAFYDANKTFISGSSTFVKTVSVPASAVYFRFTAYNIPDNTVRMFLVYPLTKLMPAIDKINKQDLNGKFTKLNNLPYTLTPNQYVIFNSGKTADIVNTKFLISSYVNVSSIDVLSINTKFSGYGDGYAFYDVNKVYISGSNVNTTTINVPANAVYFRFSAYNIDTNLVTLTGTNSLNFIKEQISTISKQIQPPTNYYYGIGKTLMIGDSLTSGAYYDDVAFKGASINQNVPYYLGKVTNNEVKNAGISGSTPMSWHSTEFSKYDYTQYDTFFIWFGTNAGLTDTMDADVNSKASYNDYASTNTGTYCKLIEEIKAVNPDASIHICTIFASSGNLATTNRVINQIATKYDLNIIDMSDLSPANYPNLHLGINNVHFGKSGNIYIANRIANDLNSYFASNQLKLEFGLTPRTN
Physico‐chemical
properties
protein length:713 AA
molecular weight: 78160,47370 Da
isoelectric point:4,87482
aromaticity:0,10940
hydropathy:-0,13801

Domains

Domains [InterPro]
DC_1253
STR
55–383
DC_1253 IPR036514
DC_1253
STR
358–709
DC_1253
SSF52266
STR
505–695
SSF52266
cd00229
ENZ
506–691
cd00229
IPR013830
ENZ
508–681
IPR013830
QBX27508.1
1 713
Architecture
STR
STR 55-709 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX27508.1
1 713
Domain Start End Length (AA) Confidence
N-terminal 1 258 258 0,9966
Central domain 259 547 290 0,5360
C-terminal 548 713 165 0,1556
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-258
Central
259-547
C-terminal
548-713

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan392
[NCBI] 		2548145 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus parauberis KRS-02083
[NCBI] 		1207545 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus parauberis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX27508.1 [NCBI]
Genbank nucleotide accession
MK448926 [NCBI]
CDS location
range 35855 -> 37996
strand +
CDS
ATGGAAATTTTAAACACATTAAATTTAACACGAATTTCAGGCGGAACTAAACTAAAGCAAGGCGATTTTGGTTCGGTATTATCTTACTCTCTTGCAGATGAAAACGGACAAGAAATCACATCGTTTGATACTAAGACAGCATATATAAACTTAGTATTAGATGATAAAATCTTGTTCACGACAACAACACAAGTAGACATTTCAAGAGTAACATTTCACATTGATAAAGCGATACCGACTGGTCTCTATTACCTTGAAATAAAGATAGATGATTATGTTTTTCCGTCTGATAAGGATTCAGTCATTTTGATTGAAGAGGGAGCGACTGCTTATGACTTAAAAGACTTAATCCCTAACTACGATGTAGTAATGACAATTACAACTATTTTGAGTGACTTAGCTCAAAAAGGAATGAACATCACTGATCTACAAACGAAAGTAAATGCTATTTATTCAAACGCCTTGTCTGATCATGCAGAAATCATCCAAGCAAGAGGTGGTCAGTCGAGTTTGGATAGTCGACTAGACGGACTAGATGCCAAAGATTCAAGTCTACAAGCACAAATTATATCTAATGATGCAGATATTGATTCTACTAATACACGCATTAACAATCTAGTAGCTAATGCAGGAAATGGAACTGTACCATCTGAAGTTATCGAAATGCGGACTGGTGATGATGGTTTTTCTTATACAACAGCAAGTGAAGCGGTCAAGCACACTGGAACGATTGTTGAGAACTCGTTTAAAGTGCCAATTACATTGACCGCTGGTTATTACATTGTCTCAGCTAATGGTACTTATGCATTACATAGCAACCAAGCATACAAAGCAACTGATTTTATTGATATTACTGGCGCAAGCATAATCAAGTTAGATACTGCCTTTTCGGTAGCTAGTGATGGTTATGCCTTTTATGATGCGAACAAAACCTTTATTAGTGGCTCAAGTACATTCGTAAAGACTGTGTCTGTACCTGCCAGTGCAGTCTATTTTAGGTTTACTGCTTACAATATCCCTGATAACACCGTTCGCATGTTCTTAGTTTATCCACTAACCAAATTGATGCCTGCGATTGACAAAATAAATAAGCAAGACTTAAACGGTAAATTTACCAAGTTGAACAATTTACCATACACACTGACGCCTAACCAATATGTTATTTTTAACAGTGGTAAGACTGCTGATATTGTTAATACTAAATTCCTTATTTCGTCTTATGTCAATGTGTCGAGTATCGATGTTTTATCCATTAACACCAAATTCTCAGGATACGGTGACGGATATGCATTTTATGACGTGAACAAGGTTTATATCTCAGGATCTAATGTCAATACAACAACAATCAATGTACCAGCAAATGCGGTCTATTTCCGATTCTCAGCTTATAATATTGATACTAATTTAGTAACTCTGACTGGTACAAATTCTTTGAACTTTATCAAAGAGCAAATTTCAACAATAAGTAAGCAAATCCAACCGCCAACAAATTATTATTATGGGATTGGAAAAACGCTTATGATTGGTGATAGTCTGACATCTGGTGCTTATTACGATGATGTGGCTTTTAAAGGCGCATCAATCAATCAAAACGTGCCATATTATTTAGGAAAAGTGACTAATAATGAAGTTAAGAATGCAGGTATTTCAGGGTCTACGCCAATGAGTTGGCACAGCACTGAGTTTTCTAAATATGACTATACGCAGTATGACACATTCTTTATTTGGTTTGGGACAAATGCTGGTCTTACAGATACTATGGATGCGGATGTTAATTCTAAAGCTAGTTACAACGACTATGCATCAACTAACACAGGGACTTACTGTAAGTTGATTGAGGAAATTAAGGCAGTTAATCCTGATGCATCAATCCATATTTGCACTATCTTCGCATCATCAGGAAATCTTGCGACAACAAATAGGGTAATCAATCAGATTGCTACCAAATACGATTTAAATATCATTGACATGAGTGATTTATCACCCGCTAATTATCCTAACTTGCATTTAGGTATTAACAATGTCCACTTTGGTAAATCAGGTAACATTTATATCGCCAACCGTATTGCAAATGATTTAAACAGTTACTTCGCAAGCAATCAACTCAAACTCGAATTTGGCTTGACGCCTAGAACAAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0946aa14a5a135e158acfe7e3c22af490907ad2aa5c066ca1d99c98a1f64e639
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7564
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank