Protein

View in Explore
Genbank accession
XCD04939.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MTKQDLEQIRRYFLEKGIRDTDLKKANALDGTEIWGVVQGGKSVKISMKDILVFLKPLMDENDGLFCGFHTSEENLKGLYPTAKEGAYAWVITEEFPDYPGEVYTYSLLHGWVATGVKASDSSKVELDDYIKSQEVDEISKLPDYTASRAIMDGSGNIIEDTYVRRDELIDGAIKGDSYLPEFNTSVFLITKEQVQYPGFLRSTIRAISGTGYVRDTLAMFEVYGLNEASQETLIQASTELQNSLMFDISVSKYKLIRVKIFQDLKKSILLYTQDIPVVRDGIDGKNGKNGIDGTNGSDGTNGTNGTDGQTPYIGSNGNWWIGNKDLGILAQGTNGAPGKDGATPTIEISDHDTWVINGEDTGKRTNGRPYLLTARIYNNTNMDIPLKINGYKDPNYLDRVTVGRYDDMIRVLLYPASSVTVEKLYMRVMNNVFTTTYPLMDYRYTTSTVTSIKQERDYVSIVILLADFNGNANYHEERSDLMIFIPSLLDSDYFRTL
Physico‐chemical
properties
protein length:498 AA
molecular weight: 55844,16700 Da
isoelectric point:4,82389
aromaticity:0,10040
hydropathy:-0,38755

Domains

Domains [InterPro]
DC_0729
ATT
16–52
DC_0729 DC_0947
G3DSA:2.60.120.220
ATT
285–350
G3DSA:2.60.120.220
DC_1486
ATT
331–470
DC_1486
XCD04939.1
1 498
Architecture
ATT
STR
ATT
ATT 16-52 | STR 180-284 | ATT 285-470 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dulem virus 41
[NCBI] 		3145759 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCD04939.1 [NCBI]
Genbank nucleotide accession
PP511520.1 [NCBI]
CDS location
range 5824 -> 7320
strand +
CDS
ATGACCAAACAGGATCTTGAACAGATAAGAAGGTATTTCCTCGAAAAAGGTATCAGGGACACTGACCTGAAAAAGGCTAATGCACTGGATGGTACTGAGATATGGGGAGTTGTACAGGGAGGAAAATCAGTAAAGATATCCATGAAGGATATACTGGTATTCCTGAAGCCTTTGATGGATGAAAATGACGGACTGTTCTGCGGATTCCATACATCTGAGGAGAACCTGAAGGGGTTATATCCTACAGCTAAGGAAGGGGCATATGCGTGGGTGATAACAGAGGAATTTCCTGATTACCCTGGAGAAGTATATACATACAGTCTGCTGCACGGATGGGTGGCTACTGGTGTAAAAGCTTCTGACAGTTCCAAGGTGGAGCTGGATGATTATATCAAGTCACAGGAGGTGGATGAAATCAGTAAATTACCTGATTATACGGCCTCCAGGGCTATTATGGATGGTTCCGGTAATATCATAGAAGATACATATGTAAGGAGGGATGAGCTGATAGACGGGGCTATAAAGGGAGATTCTTACCTCCCTGAATTCAATACCAGTGTATTTCTTATTACAAAGGAACAGGTACAATATCCAGGTTTCCTGAGGTCTACAATAAGGGCTATTTCAGGCACCGGATATGTAAGGGATACACTGGCTATGTTCGAGGTATACGGGCTTAATGAGGCCAGTCAGGAAACTCTGATACAGGCAAGTACAGAGTTACAGAATTCCCTTATGTTCGACATATCTGTGTCTAAGTATAAACTGATCAGGGTTAAAATATTTCAGGACCTTAAGAAATCCATACTACTGTATACGCAGGATATTCCTGTAGTAAGGGACGGGATAGACGGGAAAAATGGAAAGAATGGAATAGATGGCACAAATGGCTCTGATGGTACTAATGGTACTAATGGTACTGACGGTCAGACTCCGTATATAGGGAGTAATGGCAACTGGTGGATAGGGAATAAGGATCTTGGTATTCTTGCACAAGGGACTAATGGAGCTCCTGGAAAAGACGGAGCTACTCCTACAATTGAGATAAGTGACCATGACACATGGGTAATCAATGGGGAGGATACAGGGAAGAGGACGAACGGGAGGCCCTACCTTCTTACAGCCAGAATATATAATAATACTAATATGGATATACCGCTTAAAATAAACGGGTATAAGGATCCTAATTATTTAGACAGGGTTACGGTAGGAAGATACGACGATATGATACGTGTTCTTCTATATCCTGCCTCTTCTGTTACAGTTGAAAAACTGTATATGAGAGTAATGAATAATGTATTTACTACTACGTACCCATTAATGGACTACAGGTATACCACATCTACTGTAACAAGTATAAAGCAGGAAAGGGATTATGTGTCTATTGTTATACTGCTTGCAGATTTCAACGGAAATGCAAATTACCATGAAGAAAGAAGCGATCTTATGATATTCATACCCTCACTGCTTGATAGTGATTATTTCCGTACTTTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6864c66ca118320c51f15445050a60a30616c7c8470c3f49426c7e4b8c287055
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6111
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse circular DNA viruses in blood, oral, and fecal samples of captive lemurs Paietta,E.N., Kraberger,S., Lund,M.C., Custer,J.M., Vargas,K.M., Ehmke,E.E., Yoder,A.D. and Varsani,A. 2024-07-08 — GenBank