Protein

View in Explore
Genbank accession
QVW28695.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,70
Protein sequence
MAVEFDPHENIAGNLIPDQAVSVIGTKYRMLVPSNGPFYSHSLVVKSGSTVLKLGNDYLITHPYMTGTLRTGRSVHGMIWIVNPKYTTDFKVTAHYVGKGIATPAQITAERLANANKYPSDCQWEDAIGDVYFPPVDIQFDWENWKGERELMQAIVDIGKKITELPPVPDPIINNTYSFTGHEGNYSRGEILYRNDASWIFKKKPTSAFYIIQGTSNRLSDYKVVMTLNLPSQSIAATPDFRLSLRNFWGSGFAGIHLLFKDDKLQALLYSSPSSRPTTETTFASSAVIGKALFAKPFKVTVVNSWTNDTISIKVEQDGAVLLDTTLDFANPPAVLSAVWAADGIASRLSKRTTDIRYWFPVGVNDTFSFQEIPGANAGTPDGSDVLSLLKKYHSLVDKLYREAPAHPHILRKDNPHGDQSYGRMRAIELNGIADDATLAFGKTQPQLADYVNQRSAKATDFSDKMLRKTATPRTITGTFTMLPGLSSITSAKDTEASGVGTNLQVDDKVVRLIARGSSTISAGSQPITFNAGANALVLYPDARELQWNGKKILDPTTIAPYLPGNEGGGSGIFYGSSTTTVTVTGSGIQSMPFIFTWVAPDDVDTAALAMRMLTTEFGTSDSLAATPALIQKLANEFTGKLEQAKAYINGLSLMSSVSLDKTSFNLDGVENIADLSLPTSSLQRQEMAKYAKNGHTHDAATFGIGNATTAKAGLVQFGGLVNDATLALDGQYVVGQFDAVEKLEDTVNNSNTEAIIDILRFGASGNSEVMNGASYNGWMVVLNPNNYFVKKDYPVPTATFNLAELFPVTHEDTVIGIFVDLVGDNAQYVLKDNVAFAETETLTRVGEIYTDETQISGLSVRNTTRLGAFRELEEHAADVSAHIPRGPTQAQFGYTFTKDGPVWNNAVVGTRRFDGDWRMLKGPDYVPMENVDWNNASSLLLRKTATGVANHRHLIHQCPIRTSGNIIAAFTSSVDTAASVFEVVMASWEDSKGRRNRISLLMQRTNNITGSEGMLCYLGFAINYGTMRQVLIGINASSFTTAANWNSITPLVTFNLGRVGNGALQITGTVNVSPYGFSFAVDLVGKKVTFWRTYGAAAVTEIYDLAPYLTAAQIDISPLVNDITWPVYHGIGGTLDADTTVGLSYEMATFTPRPGYETAFDYIQNISEMNRIRVITAPSATKLSNTDVRTAAAAKDLASAAKRPDGVPDYLNKDRLATYSDGVNYTAVVVRD
Physico‐chemical
properties
protein length:1233 AA
molecular weight: 134079,54190 Da
isoelectric point:5,71024
aromaticity:0,09408
hydropathy:-0,15296

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVW28695.1
1 1233
Domain Start End Length (AA) Confidence
N-terminal 1 176 176 0,9888
Central domain 177 822 647 0,3399
C-terminal 823 1233 410 0,5589
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-176
Central
177-822
C-terminal
823-1233

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_8
[NCBI] 		2831677 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW28695.1 [NCBI]
Genbank nucleotide accession
MW760841 [NCBI]
CDS location
range 160424 -> 164125
strand -
CDS
ATGGCAGTCGAATTTGACCCGCATGAGAACATCGCGGGGAATTTAATCCCCGATCAAGCGGTCTCGGTTATCGGCACCAAGTACCGAATGCTGGTACCTTCTAACGGCCCTTTTTACTCCCATTCTCTGGTCGTGAAGAGCGGCTCTACCGTTTTAAAACTCGGTAACGACTATCTGATTACCCATCCGTACATGACTGGCACGTTGCGCACTGGCCGTTCGGTACACGGGATGATTTGGATTGTTAACCCGAAATACACCACCGATTTTAAAGTCACTGCACACTACGTGGGCAAGGGCATTGCGACCCCAGCCCAGATTACTGCTGAGCGCTTGGCTAACGCGAACAAATACCCAAGTGATTGCCAGTGGGAAGATGCCATCGGTGATGTGTACTTCCCGCCAGTGGATATCCAGTTTGACTGGGAGAACTGGAAGGGTGAACGTGAGCTGATGCAGGCTATCGTGGATATCGGTAAAAAGATAACCGAACTTCCTCCGGTTCCCGATCCAATCATCAACAACACGTACAGCTTTACTGGGCACGAAGGGAATTACAGTCGCGGTGAAATACTGTACCGTAATGACGCCAGTTGGATATTCAAAAAGAAACCGACCTCCGCGTTTTACATCATCCAGGGCACCAGTAATCGGTTGTCGGATTATAAAGTCGTCATGACTTTAAATCTTCCATCCCAGTCCATCGCAGCGACACCGGATTTCCGACTTTCCCTGCGTAACTTCTGGGGTAGCGGCTTTGCCGGTATTCACTTGTTATTTAAAGATGACAAGCTACAGGCGCTGTTGTACAGTTCGCCGAGTTCCAGGCCGACCACGGAAACCACATTCGCATCTTCTGCGGTTATCGGAAAAGCGTTGTTCGCTAAACCGTTCAAAGTGACGGTGGTTAACAGCTGGACGAATGACACCATCTCCATTAAAGTGGAACAAGACGGTGCGGTGCTCCTGGACACGACGTTGGATTTTGCAAACCCGCCTGCTGTACTGTCTGCTGTTTGGGCAGCGGATGGGATTGCCTCACGGCTATCAAAGCGCACAACCGATATTCGTTATTGGTTCCCCGTCGGGGTGAACGATACGTTCTCATTCCAGGAAATCCCTGGTGCGAATGCGGGTACCCCGGACGGCTCTGATGTTCTGTCATTGCTGAAAAAATATCATAGCCTCGTTGACAAGCTATACCGTGAAGCGCCAGCACACCCACACATCCTGCGTAAAGACAACCCACACGGCGACCAGTCTTACGGTCGGATGCGGGCTATCGAGCTGAACGGGATTGCCGATGACGCCACCTTGGCGTTTGGTAAGACACAGCCACAGTTAGCGGATTACGTGAACCAGCGTAGTGCGAAGGCCACTGACTTCTCTGACAAGATGCTCAGGAAGACAGCGACCCCGCGTACGATTACGGGCACGTTTACCATGCTGCCGGGTTTGTCTTCTATTACCTCAGCCAAAGACACCGAAGCCTCAGGGGTGGGGACTAACCTGCAAGTGGATGATAAAGTGGTGCGCTTGATTGCGCGTGGCTCATCAACCATCAGTGCAGGCAGTCAGCCTATTACTTTCAATGCGGGCGCGAATGCGCTGGTGTTGTACCCGGATGCGCGTGAGCTGCAATGGAACGGTAAGAAGATTCTTGACCCGACCACCATCGCGCCTTATTTACCGGGTAACGAGGGTGGAGGTTCCGGGATCTTCTACGGTTCCAGCACCACAACAGTTACGGTGACAGGTAGCGGTATTCAGTCTATGCCGTTTATCTTTACCTGGGTTGCACCGGACGACGTTGATACAGCCGCGTTGGCGATGCGTATGCTGACCACGGAGTTTGGTACGTCAGATTCTCTGGCGGCTACTCCCGCTCTGATTCAGAAACTGGCGAACGAGTTCACCGGTAAACTGGAACAGGCCAAAGCGTACATCAACGGCCTGTCCCTGATGTCATCCGTGTCGTTGGATAAAACCAGCTTCAACCTGGACGGCGTGGAAAACATTGCTGACCTCTCTTTACCGACCTCTAGCCTACAACGTCAAGAAATGGCGAAGTATGCGAAGAACGGCCATACCCATGATGCAGCAACCTTCGGGATTGGTAATGCCACGACGGCAAAAGCCGGACTGGTACAATTCGGGGGCTTGGTCAATGACGCCACACTGGCGTTAGACGGGCAGTACGTGGTGGGGCAGTTTGATGCGGTGGAGAAACTCGAGGACACGGTAAACAACTCCAACACCGAAGCGATTATCGATATCCTGCGCTTTGGCGCATCCGGTAACAGCGAAGTGATGAACGGGGCCAGCTATAATGGCTGGATGGTAGTGCTGAATCCGAATAACTACTTCGTGAAGAAAGACTACCCGGTACCGACCGCAACCTTTAACCTGGCAGAGTTGTTCCCGGTGACGCATGAAGATACTGTGATTGGTATTTTCGTCGACCTCGTGGGCGACAACGCGCAATACGTGTTAAAGGACAACGTGGCCTTTGCAGAAACGGAAACCCTGACGCGGGTCGGTGAAATCTATACCGATGAAACCCAAATCTCCGGGCTGTCCGTTCGCAATACCACGCGCCTTGGTGCGTTCCGTGAGTTGGAAGAACACGCCGCTGATGTCAGCGCGCATATTCCACGCGGACCAACGCAAGCCCAATTCGGTTATACCTTTACGAAGGATGGGCCGGTATGGAACAACGCGGTTGTGGGTACTCGTCGTTTTGACGGTGACTGGCGTATGCTGAAAGGGCCGGACTATGTTCCAATGGAGAACGTGGACTGGAACAACGCGTCGAGCCTGTTGCTGAGAAAGACGGCTACTGGGGTAGCAAACCACCGCCACCTGATTCACCAGTGCCCGATCAGAACCTCAGGCAACATCATCGCGGCCTTTACGTCGTCGGTGGACACAGCAGCGTCGGTATTCGAAGTGGTGATGGCCTCCTGGGAAGACAGTAAAGGTCGCCGCAATCGCATCTCTCTGCTGATGCAGCGCACCAACAACATTACCGGCAGTGAAGGGATGTTGTGTTACCTGGGCTTTGCTATCAACTACGGCACCATGCGTCAGGTGTTAATCGGTATTAACGCTTCCTCGTTTACTACGGCAGCGAACTGGAACAGCATCACACCGCTCGTGACCTTCAACTTAGGTCGTGTAGGTAATGGGGCGTTGCAGATTACCGGTACGGTGAATGTTAGCCCTTATGGGTTTAGCTTCGCGGTAGACCTGGTCGGGAAGAAAGTGACCTTCTGGCGTACCTACGGGGCGGCAGCAGTCACCGAAATTTACGACCTGGCACCATACCTGACCGCTGCACAAATTGACATCTCGCCGTTGGTTAACGATATCACCTGGCCCGTGTATCACGGCATCGGTGGCACGTTAGACGCGGACACGACGGTCGGACTGTCGTACGAAATGGCTACCTTCACTCCACGTCCGGGTTATGAAACCGCGTTCGATTACATCCAGAACATTTCTGAGATGAACCGTATTCGCGTTATCACCGCACCTTCTGCAACCAAGCTGTCGAATACCGATGTTCGTACAGCTGCGGCTGCAAAGGACCTCGCTTCGGCTGCCAAGCGTCCAGATGGGGTTCCTGATTATCTGAACAAAGACCGCTTAGCGACCTACAGCGACGGTGTGAACTACACCGCTGTGGTAGTGCGTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ca439c1a77b58eb61e93367f509d16d9c273a5ba7a6995c66ce136fbf3dd7de1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2854
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_8 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank