Protein

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Genbank accession

YP_009785384.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence UniProt/TrEMBL

Probability 1,00

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

Evidence RBPdetect

Probability 0,90

Evidence RBPdetect2

Probability 0,93

Protein sequence

MNISQVQTLHVAEEARDLTADTIGVNNDGNLDARGRRIVNVADAQDVGDAVNLGQIKRWNDSALNSANRAKQEADRATARANDANNSANASASSASSSAGSAELAKRWATSDTVVESDLESSRTYAIHSMSYRNEAKDSADRAAVSETNAKASEGSAANSAAAAKVSETNAKASEERAITEASKLGNMNDFAAAIESVTGNDVKMKGAVSSPGNITGGGLVSTGAASIQKGALVGEDLIVGRDITAKQDMYSQRNIAVAGVTYAQGGIEQTLATNIYNKLYRLHINSNPQHVGQRQGLHIGWNEGGNGESNFITNRGAGSGGFVFRTVNAENSVETGRVDITGGGVLYANHLQVRSGARIEGNNNIVGQNLYAGMGSTMLEGNGNLSGGIWAQWGNLWSGLHNNSLFAKPPSGVQLFTARGGDYLEGRVDGKSVGFRWFQSDRRLKEDIRVVRSADDMLNIIRSYIPVSYKYKDASYTDNRGRTNTIEGKRSRAGFITQDLIRLWPEAVDVMSDGMQSPDPNQIIGGLMLLVKNLDARVQELESKLMTD

Physico‐chemical properties

protein length:	549 AA
molecular weight:	58512,87210 Da
isoelectric point:	5,92998
aromaticity:	0,05464
hydropathy:	-0,46794

Domains

Domains [InterPro]

IPR005604
ATT
1–33

IPR005604 Coil IPR030392

DC_0355
STR
1–483

DC_0355 DC_0734

IPR030392
CHP
441–509

IPR030392

YP_009785384.1

1 549

Architecture

ATT

STR

CHP

RBD

ATT 1-33 | STR 34-483 | CHP 484-502 | RBD 503-549

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	1	33	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits
DC_0355	STR	DC_0355	1	483	Novel HMM	DC_0355	Central	Low	Positional only	3 proteins / 3 hits
Coil	Unmapped	-	60	87	Coils	Coil	-	-	-	-
IPR030392	CHP	DC_0088	441	546	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	441	509	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
DC_0734	RBD	DC_0734	503	549	Novel HMM	DC_0734	C-terminal	Low	Positional only	1 proteins / 1 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

YP_009785384.1

1 549

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	52	52	0,8638
Central domain	53	257	206	0,8629
C-terminal	258	549	291	0,7928

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-52

Central
53-257

C-terminal
258-549

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Yersinia phage phiYe-F10 [NCBI]	1662463	Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teetrevirus
Host	Yersinia enterocolitica [NCBI]	630	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

YP_009785384.1 [NCBI]

Genbank nucleotide accession

NC_047755.1 [NCBI]

CDS location

range 33911 -> 35560
strand +

CDS

TTGAACATATCTCAGGTTCAGACCCTTCACGTTGCTGAGGAAGCCCGTGACCTTACCGCTGATACAATTGGCGTTAACAATGATGGGAACTTGGATGCTCGTGGTCGTCGTATCGTTAACGTTGCGGATGCGCAAGATGTAGGTGATGCAGTCAACTTAGGTCAAATCAAACGGTGGAACGACTCTGCGTTGAACTCTGCGAATCGCGCGAAACAGGAAGCTGACCGTGCGACCGCTCGTGCAAACGATGCGAACAACTCTGCGAACGCATCTGCAAGCTCTGCAAGCTCTTCTGCTGGGTCTGCTGAGTTGGCGAAACGCTGGGCTACCAGTGATACAGTAGTTGAGAGTGACCTTGAGTCTTCTAGAACCTACGCGATTCACTCCATGTCATATCGTAATGAAGCTAAAGACTCTGCTGACCGTGCCGCTGTTTCCGAGACCAATGCTAAGGCCTCCGAAGGGAGCGCTGCTAACTCGGCTGCTGCCGCTAAGGTATCAGAGACCAACGCTAAGGCCTCCGAGGAGAGAGCAATCACTGAGGCGAGCAAGCTGGGAAACATGAATGACTTTGCGGCTGCCATAGAGTCAGTGACAGGGAACGATGTGAAGATGAAGGGCGCTGTGTCCTCACCCGGCAATATCACAGGCGGTGGTTTAGTCTCCACGGGTGCGGCGAGTATCCAGAAAGGTGCGCTTGTTGGAGAGGACTTGATTGTTGGAAGGGATATTACTGCAAAGCAGGATATGTACTCTCAGCGAAACATTGCCGTAGCTGGGGTCACATATGCTCAGGGAGGCATTGAGCAAACACTAGCAACCAACATTTATAATAAGCTGTACCGACTTCACATTAACAGCAATCCACAACATGTTGGACAACGGCAGGGTCTACATATTGGATGGAACGAGGGTGGTAACGGTGAGTCAAACTTTATCACCAACCGTGGTGCTGGTTCTGGCGGATTCGTGTTCCGCACAGTCAATGCTGAGAACTCAGTAGAGACTGGTAGAGTAGATATTACCGGAGGCGGTGTACTCTACGCGAATCACCTACAGGTTCGTTCAGGTGCCCGAATTGAGGGGAACAACAACATCGTAGGTCAGAACCTCTACGCAGGAATGGGAAGTACGATGCTTGAAGGTAACGGTAATCTATCTGGTGGCATCTGGGCGCAGTGGGGTAACTTATGGAGCGGCCTACACAACAACTCACTCTTCGCCAAACCACCCAGCGGTGTTCAGTTATTTACCGCAAGGGGCGGTGATTATCTTGAAGGTAGGGTTGATGGTAAATCCGTTGGGTTCCGGTGGTTCCAATCTGACAGAAGGCTGAAAGAAGACATTAGGGTTGTTCGCTCTGCTGACGACATGCTGAACATCATTCGGTCGTACATACCAGTGTCCTACAAATATAAGGACGCATCCTATACAGATAACAGGGGTAGAACAAACACCATTGAAGGTAAGCGGTCACGGGCTGGCTTCATCACACAGGATTTAATACGCTTGTGGCCCGAGGCTGTGGACGTGATGTCAGATGGAATGCAGTCCCCTGACCCGAACCAGATTATTGGCGGATTGATGTTACTTGTTAAGAACCTAGACGCTCGCGTTCAGGAGCTTGAATCTAAACTTATGACAGACTAA

Genome Context

Tertiary structure

PDB ID

6c8c50932ac02f35aaef97a084d9d364f171171b08a5f71d29587014136b1faa

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6150

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence