Protein

View in Explore
Genbank accession
GENB_a5d3a3fa78ca [GenBank]
Protein name
receptor binding protein
RBP type
TSP
Evidence RBPdetect
Probability 0,59
Protein sequence
MKHGKIKRFSTLTLLASATILVPLSTSAEETTNSSTETSSSMVEPTATEEKLWQSDFPGGKIGEWQDVIGKTNRELAGESLAISRDAAAGNNAVSLNLDSPKLADGEVETKFKYTAGSGRTGVIIRGNTKDSWVFVGYNANGKWLVESPNSWNDSISGPTLNEDTNYLLKVRYVGEKITIWLNTTLIYEGEPVLANGDKIPTEAGHVGVRLWYDKKIVNYDYFKNGPVDSIPEIVPEVTQIAPVKVFTKIGVAPKLPKQVKVTYNTGKEANEAVRWDEIDPAAYKEPGTFEVDGTLENTNIKAKASIVVAKDNEAEKGDKISSADLTAVVDPQFPRIIRYEDPQSNQVIFNGQHEKIDQVMIDGKAYKATAEKQKSEANQAVYNVAVPEIGLHFTTTLTVSEGQELAMKLSDIREEGIKIHTISIPNQGLISVNSTDEGATFAGVVMNTGTNANNGNKNGDTIQDLTTTSQEETKKYMYGFLNTANYAASFWTNAYGDGSVDGSDNNRIHKQTKEAATGFVTTLSSGAWTYRPFDAPEDYTTGETPEVKVKFSKDSNDDNRVDWQDAAIGFRSIMNNPMGAEKVPELVNQRIPFNFASQATNPFLVTLDESKRIYNLTDGLGQMNLLKGYQNEGHDSAHPDYGAIGQRPGGEQALNQLIDEGHKLNAVFGVHINDTESYPEAKGFNEELVDPTKRGWDWLDPSYFIKQRPDALSGRRYERFKELKQKAPNLDYIYVDVWGNQGESGWASRQLSKEINSLGWFTTNEFPNALEYDSVWNHWSAEKDYGGTTTKGFNSTIVRFIRNHQKDTWIISDNPLLGGAEFEAYEGWVGKTNFNTYRQKTFAINVPTKFLQHYQITNWETTTAADGQIYGTIKLANGAEKVTVTQADANSPRSITLNETEVLKGDAYLLPWNVNGQDKLYHWNPKGGTSTWSLDKKMQGKTNLHLYELTDQGRIDKGAIATTNNQVTIQAEANTPYVIAEPDSIEPMTFGTGTPFKDPGFNEANTLKNNWKVFRGDGEVKKDANGDYVFSSEKERTEIKQDINLPKPGKYSLYLNTETHDRKATVTVKIGGKKYTRTVNNSVAQNYIQADINHTSRKNPQYMQNMRIDFEIPDNAKKGSVTLAVDKGNSVTKFDDLRIVERQTDIMNPDKQTVIKQDFEDTQAVGLYPFVKGSAGGVEDPRIHLSERNEPYTQYGWNGNLVSDVLEGNWSLKAHKQGAGLMLQTIPQNIKFEPNKKYTVQFDYQTDGENVFTAGTINGELKNNNDFKPVGELTSTAADGQTKHYEAEIIGDASGNTTFGIF
Physico‐chemical
properties
protein length:1303 AA
molecular weight: 144712,82800 Da
isoelectric point:5,22847
aromaticity:0,09440
hydropathy:-0,65211

Domains

Domains [InterPro]
IPR011081
STR
241–298
IPR011081 IPR014718 IPR035364 G3DSA:2.60.120.260 G3DSA:2.60.120.260
IPR025706
STR
565–838
IPR025706
GENB_a5d3a3fa78ca
1 1303
Architecture
STR
STR
ENZ
STR
STR 241-298 | STR 305-838 | ENZ 846-955 | STR 989-1303
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage IME_EF3
[NCBI] 		1416012 Uroviricota > Caudoviricetes > Efquatrovirus >
Host Enterococcus faecalis
[NCBI] 		1351 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
PQ520262.1_CDS_[complement(3..3911)] [NCBI]
Genbank nucleotide accession
PQ520262.1 [NCBI]
CDS location
range 3 -> 3911
strand -
CDS

  




        

        
      
    
  






  

  
  

    
Genome Context

  


  

    

      
Genome Context

      

    

  


  

  


  

  

  
  

  


  

    
Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
f07d1ea6b1f51d395d59316362bf5a0fcf9a1f8c16754a40c8c8e5f7193e527c

                    

                    
                      AlphaFold3
                    
                  

                  

                  

                    

                      Source
                      AlphaFold3
                    

                    

                      Method
                      AlphaFold3
                    

                    

                      Resolution
                      0,9287
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50