Protein

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Genbank accession
UYD57643.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTGDLTVSKSGAEPKIAVNRDGRNMYMYDSGNNQGIYSSNLPGLGNIALLSRDLANGEVSLAAGQVSTTKTKIHGIPTSIAAQGAGGDALTRKDYVDSAIAAGDALQVSKSGDTMTGNLFAPAVLVSSAQNASPNALTRKDYVDAELAKKLNLTGGTLTGNITAPAIYEAGQRVYSPNNPPPSLTPTQIGNALASMAYDAVGQYAMLWVAVDKGTWLVPGTVVPGSQLRYSTAEGREPANSPPGNWRLHGRTNQGGQWGAWNVSLWQRVS
Physico‐chemical
properties
protein length:270 AA
molecular weight: 28163,13970 Da
isoelectric point:8,72878
aromaticity:0,06296
hydropathy:-0,28556

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYD57643.1
1 270
Domain Start End Length (AA) Confidence
N-terminal 1 64 64 0,0081
Central domain 65 259 196 0,0712
C-terminal 260 270 10 0,9985
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-64
Central
65-259
C-terminal
260-270

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM3
[NCBI] 		3101596 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD57643.1 [NCBI]
Genbank nucleotide accession
OP380595 [NCBI]
CDS location
range 114 -> 926
strand +
CDS
ATGACAGGGGACTTGACTGTTTCCAAGAGTGGTGCCGAACCTAAGATTGCCGTTAACCGTGACGGGCGCAACATGTATATGTACGACAGCGGTAATAATCAAGGTATTTACTCCAGTAACTTGCCGGGCCTAGGCAATATTGCCTTGTTGTCACGGGACCTAGCCAATGGTGAGGTGTCTCTTGCCGCTGGTCAAGTATCTACAACAAAGACTAAGATTCATGGCATACCGACGTCCATCGCCGCACAAGGGGCGGGTGGTGATGCGCTGACACGCAAGGACTATGTCGATTCTGCTATTGCTGCTGGTGACGCGCTCCAAGTGTCTAAATCTGGCGATACCATGACCGGCAATCTTTTTGCCCCTGCTGTATTGGTATCGTCTGCTCAGAATGCATCGCCAAACGCGCTGACTCGCAAGGACTATGTTGACGCAGAATTAGCAAAGAAACTTAATCTGACCGGTGGAACCCTGACTGGTAATATCACCGCACCCGCGATATATGAGGCTGGTCAACGGGTGTACAGCCCCAACAACCCGCCGCCAAGTCTGACACCAACCCAAATCGGCAACGCTTTGGCGAGTATGGCTTATGACGCTGTTGGTCAATACGCAATGCTCTGGGTGGCTGTTGACAAAGGAACATGGCTTGTACCCGGAACAGTTGTTCCAGGCTCGCAGCTTAGATACTCTACAGCTGAAGGTAGAGAGCCAGCCAATTCTCCTCCAGGAAATTGGCGTTTGCATGGTCGTACAAACCAAGGCGGACAATGGGGTGCTTGGAACGTTTCGCTTTGGCAGCGTGTTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b0273eb2cb5751a5f9c4fef4af5d6d6ba3a5d882bb8d7f9e6a570aceb3e7409c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7734
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank