Protein

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Genbank accession
UYE98977.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MLPFPIISKTTIVPSENTIITLLKTGGTLIESNINKTPTDFYTESYNAIQFKPTSAKIQVGSSGIPSIWQIGNSTNFIIETYIKLSSTGTRILCGNLQNNGTGSWWMVINNTFQDNSVVALDGFSTTGSVQRFHFTNQATISPNTWHHIKLQRLGTNLTCEVDGVLIGTLTMTLGFMNQSNPFTVGDSTDNAYPFNGIIDSFNITMSS
Physico‐chemical
properties
protein length:208 AA
molecular weight: 22746,42180 Da
isoelectric point:5,83420
aromaticity:0,09615
hydropathy:-0,04519

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
10–205
G3DSA:2.60.120.200
IPR013320
STR
39–205
IPR013320
IPR013320
STR
45–205
IPR013320
PF13385
LEC
74–204
PF13385
UYE98977.1
1 208
Architecture
STR
STR 10-205 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XbC2
[NCBI] 		2978503 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas vesicatoria
[NCBI] 		56460 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE98977.1 [NCBI]
Genbank nucleotide accession
OP292654.1 [NCBI]
CDS location
range 358349 -> 358975
strand -
CDS
ATGTTACCTTTTCCGATTATATCTAAAACAACAATAGTTCCGTCAGAAAATACTATTATTACACTATTAAAAACTGGTGGAACATTAATTGAATCAAATATTAATAAAACTCCAACAGATTTTTACACTGAATCATATAATGCCATTCAATTTAAACCAACCTCAGCAAAAATACAAGTTGGCTCAAGCGGTATTCCATCTATATGGCAAATTGGTAATAGTACTAATTTTATTATAGAGACTTACATTAAGTTAAGCAGTACTGGTACACGTATTTTATGTGGTAATCTTCAAAATAATGGTACAGGTTCATGGTGGATGGTTATCAATAATACATTCCAGGATAACTCTGTAGTCGCTTTGGATGGATTTAGTACCACTGGTTCAGTTCAACGTTTTCATTTCACAAATCAAGCAACTATTTCACCTAACACATGGCATCACATTAAATTACAGCGATTAGGTACTAATTTGACATGTGAAGTTGATGGAGTATTGATTGGTACATTAACTATGACATTAGGTTTTATGAATCAATCAAATCCATTTACTGTAGGTGACAGTACTGATAATGCTTATCCTTTTAATGGTATTATAGATAGCTTCAACATAACAATGTCATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
313c698ea8e999008dac20c19e6e13bf41b441008980cfbd9b8180039d611722
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7543
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of two novel jumbo bacteriophages infecting Xanthomonas vesicatoria isolated from agricultural regions in Mexico Rubi-Rangel,L., Villicana,C., Leon-Felix,J., Amarillas,L., Carrillo-Fasio,A. and Lightbourn-Rojas,L. 2024-07-15 — GenBank