Protein

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Genbank accession
AGH57796.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MALTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYVVDNRPGEVLYTNVAPIDENSNLDLTSPNNVLYKYNSIEGGIIVPRGASLVGTDLRRTKIIPKYVPYPTVFAAKGINTEDQVPSRTSIFKVTGGTYFWQFSFFDGAEEGVYFKPDSVETLAPKFSHHRLTCFEFADGVNSLSTLISQGRVPNSDYSAVPNILERTDLEIYYQKVSKAFASIPDTSGDPAADQIQARVEENRIVGPISDEYRVLQITRNGNTATAVTVDEFDNPRDHGFSVGVNINISGVTGSTGPQSELDASLYNGSFTVTSASGNIFTYQMIQEPTGNAVGSNITVKTEIDTVDSASPYAFNLSLRSVWGMNGMLADGSRATGFKSMVVAQFTGLSLQKDDRAFVRYNESTGNYDVASAGDGAHLDGFAEYRKGWAHRHIVASNDAFIQAVSVFAVGYGSHFTCESGADMSITNSNSNFGNTALRAAGFKAKSFSKDKAGEITHIVPPKALNVISTIASGASGEASITLANDGSVNGVVQGMTVTGDNIGTGATVVSVNTNTRIITLSVVNSDAVNGNVIFGEETSVNWVNIDIQRTKVINQSLAGAGGTPGTRLYLYGYTAPAGAPTTRVQGYTVGARQDGTGVSAIPDKINCLLVAQGATEATVQSAFISPYGPSVSGLAAGVAGSPIQYDSNTYTISGVAGQVGGWYLSVDSVDNDIYTTLSTNTRYNNVNFTPTTFLRRIPDPRDLADRTFRIRLKIDKDKTNPLPRDPLSGYVLQPLNSDSTNYKLDKTFYIYDIEKVQEFERGVSDGLYYITLLCASITPSTSNFNDRKFSQNVNEVYPTFDRDNPVADPNPAVSVADNETIGLVYSTDGATPTPNKDPKRSITKEAIKFLLTDTGWTQPGTTPNFDSVNNRLSNVELTARAGDEEVRKINIRENNDGTVAPIPVEFRRHSILRSGNHTFEYLGFGPGNYSTAFPQTQVETLSADQVKFSQSIKEEAGVAFYSGLNSNGDLFIGNQVINPVTGQITNEDIAQLNVVGEENTTIETFSELVLTDKLTVIGGASNQLESIFAGPVTFQGQVSSTSNLIAKKITYNNQDGTVIKQTLLAPEDALGQPDFTNITGYTTPSDGDLVYNINWTPGKSLGWIYYQGLWKEFGITDTGQIDIQTFVDGDGVDQQHLGFGVAANSTYRANILGNVRIDGNLTTTGTGGISADKYVTRTYTGDGNTLTYNITTFTGGVKHTADSLLVFLNGVAQIGGTNFSVDANGANIIFGAGDAPLSTDTIHIIELPI
Physico‐chemical
properties
protein length:1325 AA
molecular weight: 142719,46900 Da
isoelectric point:4,81099
aromaticity:0,09283
hydropathy:-0,23419

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGH57796.1
1 1325
Domain Start End Length (AA) Confidence
N-terminal 1 90 90 0,9752
Central domain 91 310 221 0,9347
C-terminal 311 1325 1014 0,0512
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-90
Central
91-310
C-terminal
311-1325

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage KBS-M-1A
[NCBI] 		889950 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH57796.1 [NCBI]
Genbank nucleotide accession
JF974293.1 [NCBI]
CDS location
range 19209 -> 23186
strand -
CDS
ATGGCTCTTACTAGACTTAAGAATATTATTACGTCCAGAACTGGACGTATTATCTACGTTAACCCTGACGATTTCGATGCATCTGATGCTATTGATAATAGGGGAAACTCTGCACTTCGTCCGTTTAAGTCTATTCAGAGGGCATTCTTAGAAGTTGCTAGATTTTCGTATCGAGTCGGTCTGTCAAACGACGAATTTGACGCCTTCTCGATTATGCTTTATCCAGCAGAATATGTTGTTGATAACAGACCTGGAGAAGTTCTTTATACAAACGTTGCTCCTATTGATGAAAACTCTAACTTAGATTTAACATCACCAAACAACGTTCTTTACAAATATAATTCTATTGAAGGTGGTATCATTGTTCCTAGAGGTGCTTCCCTCGTTGGTACTGACCTTCGTCGTACAAAAATTATTCCTAAGTATGTTCCCTATCCTACAGTATTTGCTGCAAAGGGAATCAACACAGAAGACCAAGTTCCTTCTAGAACTTCAATCTTTAAGGTAACTGGTGGTACTTATTTCTGGCAATTCTCGTTCTTTGATGGTGCTGAAGAGGGTGTCTATTTCAAACCAGATAGTGTAGAAACACTTGCACCTAAGTTCTCTCACCATAGATTGACATGTTTCGAGTTTGCTGATGGTGTAAACTCTCTTTCAACTCTTATTAGTCAAGGAAGAGTACCAAACTCAGACTATTCTGCAGTCCCTAATATCCTTGAAAGAACTGACTTAGAGATTTACTATCAGAAAGTATCGAAAGCATTTGCATCAATTCCCGATACATCTGGAGACCCTGCAGCAGACCAAATTCAGGCAAGAGTTGAAGAAAACAGAATCGTTGGTCCTATTTCTGACGAATATCGTGTTCTTCAAATTACTCGCAACGGCAATACTGCAACCGCAGTTACTGTTGATGAATTTGATAACCCCAGAGACCATGGATTCTCTGTTGGTGTTAACATTAACATCTCTGGTGTTACTGGTTCTACTGGACCACAATCAGAACTGGATGCTTCCTTGTATAATGGTTCATTCACAGTAACATCTGCGTCTGGTAACATTTTTACCTATCAGATGATTCAAGAACCTACAGGTAATGCCGTTGGTTCTAACATTACAGTTAAGACTGAGATTGATACTGTTGACTCTGCATCACCATATGCGTTCAACTTGTCTCTTAGAAGTGTCTGGGGCATGAATGGAATGCTCGCAGATGGTTCTCGTGCAACTGGTTTCAAATCGATGGTTGTTGCACAGTTTACGGGTCTATCTTTGCAGAAAGATGATAGAGCGTTTGTAAGATATAATGAGTCTACTGGTAACTATGATGTTGCATCTGCTGGTGATGGTGCTCACTTAGACGGTTTTGCTGAGTATCGTAAAGGTTGGGCACACAGACACATTGTTGCATCTAACGACGCATTTATTCAGGCAGTTTCGGTGTTCGCGGTTGGATATGGTTCCCACTTCACTTGTGAGAGTGGTGCTGACATGTCCATTACCAACTCTAACTCCAACTTCGGTAATACCGCTCTTCGTGCTGCTGGATTTAAGGCAAAATCTTTCTCTAAAGATAAAGCAGGAGAGATTACACATATTGTTCCACCTAAAGCACTTAATGTTATTTCAACAATCGCAAGTGGCGCTAGTGGCGAAGCATCAATCACTCTTGCAAATGATGGGTCGGTTAATGGTGTTGTTCAGGGAATGACTGTTACTGGAGACAATATTGGAACTGGAGCAACAGTTGTCTCTGTCAATACAAATACTAGAATTATTACACTTTCGGTAGTTAATTCTGATGCAGTTAATGGCAACGTAATTTTTGGTGAAGAAACTTCTGTTAACTGGGTCAACATTGATATTCAACGTACTAAAGTAATTAACCAGTCTCTTGCTGGTGCTGGTGGTACTCCTGGCACCAGACTTTACCTCTATGGATATACTGCTCCTGCGGGTGCCCCAACAACCAGAGTTCAGGGTTATACAGTTGGCGCTCGTCAAGATGGTACTGGAGTAAGTGCAATTCCTGATAAAATTAACTGCTTATTGGTTGCCCAAGGTGCAACTGAGGCGACAGTACAATCTGCATTTATTTCACCCTATGGTCCCAGTGTATCTGGTCTCGCTGCTGGTGTTGCTGGTTCACCCATTCAGTACGATAGCAATACCTACACTATTAGTGGAGTTGCTGGACAAGTCGGTGGTTGGTATCTTTCTGTTGATTCTGTAGATAATGATATCTACACAACACTGTCTACTAATACTCGTTATAACAATGTTAACTTTACTCCAACTACATTCTTAAGAAGAATCCCTGACCCTAGAGACCTTGCAGACAGAACATTCCGTATTCGTTTGAAGATTGATAAAGATAAGACTAATCCATTACCCAGAGATCCCCTGAGTGGTTATGTACTACAACCATTGAATAGTGATAGTACAAACTACAAACTTGATAAAACTTTCTACATTTACGATATTGAAAAAGTACAAGAGTTTGAGAGAGGTGTTTCCGATGGACTTTACTACATTACCCTCCTTTGTGCATCTATTACACCTTCAACTTCTAACTTCAACGATAGAAAGTTCTCCCAAAACGTCAACGAAGTCTATCCTACGTTTGACAGAGACAACCCTGTTGCTGACCCTAACCCTGCTGTATCCGTCGCTGACAACGAAACTATCGGTCTAGTATATTCTACTGATGGTGCAACTCCAACTCCAAACAAAGACCCCAAACGTTCTATTACTAAGGAAGCGATTAAGTTTCTTCTGACTGATACTGGTTGGACACAACCAGGTACAACACCCAACTTTGACTCTGTTAATAATAGACTTTCTAACGTTGAACTTACTGCTCGTGCTGGTGATGAAGAAGTTAGAAAGATTAACATCAGAGAGAACAATGATGGAACAGTTGCTCCTATTCCAGTAGAGTTCAGAAGGCACTCCATCTTACGTTCAGGTAACCATACGTTTGAATATCTTGGTTTCGGTCCTGGTAACTATTCTACCGCATTCCCCCAGACTCAGGTAGAAACTCTGAGTGCAGACCAAGTTAAGTTCTCGCAGTCTATTAAGGAAGAAGCAGGTGTTGCTTTCTATTCTGGTTTGAACTCTAACGGTGACCTGTTTATTGGTAACCAGGTTATTAACCCTGTTACTGGTCAAATTACAAACGAAGATATTGCACAACTGAACGTTGTTGGTGAAGAAAATACAACAATTGAAACATTCTCTGAGTTGGTTCTTACCGATAAACTTACGGTTATTGGTGGTGCATCTAACCAGTTGGAATCTATCTTTGCTGGTCCTGTTACTTTCCAAGGTCAAGTATCTTCTACTAGTAACTTAATTGCTAAGAAGATTACCTACAATAACCAAGATGGTACTGTTATTAAACAGACCTTACTTGCACCAGAAGACGCACTGGGTCAACCAGACTTTACTAATATCACTGGATATACCACACCTTCCGATGGTGATTTAGTTTACAACATTAACTGGACACCTGGTAAATCTCTTGGATGGATTTACTATCAAGGTCTTTGGAAAGAGTTTGGAATCACAGATACAGGTCAAATTGATATTCAAACGTTTGTAGATGGTGATGGTGTAGACCAGCAGCATCTTGGTTTTGGTGTTGCTGCTAACAGCACTTATAGAGCAAACATTCTTGGTAATGTTCGAATTGATGGTAACTTAACTACAACTGGTACTGGTGGTATTTCTGCTGACAAGTATGTCACCAGAACATATACTGGTGATGGCAATACTCTCACCTATAATATCACCACATTCACTGGTGGTGTTAAGCATACGGCGGATTCTCTGCTAGTATTCTTAAATGGTGTTGCTCAGATTGGTGGAACTAACTTCAGCGTTGATGCAAATGGTGCCAACATTATCTTCGGTGCTGGCGATGCACCACTCTCTACGGATACGATTCATATCATTGAATTGCCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
db6bd3810fa111dc0f93dee3ca03c33ea3915daf9567e76afb789808443fa8e3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3858
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage KBS-M-1A Henn,M.R., Lennon,J., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank