Protein

View in Explore
Genbank accession
YP_009903565.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALYREGKAAMAADGTVTGTGTKWQSSLSLIRPGATIIFLSSPIQMAVVNKVVSDTEIKAITTKGAVVASTDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKEFDFESLQNLANKIKADSEAAESSAAAAAASESKAKTSEDNAKSSENSAKNSEVAAETTRYQIQQIIDNAGDQSTLVVLAQPDGASKSGWKRDPLHAAIKTQTVSAALSAIQISVWEFAHYITDKPDASDPNTWDWSPAIQAAFDYIGTYVSLTINGKTRYASASLNFPTGYYRCSSQVIADYSSYSGYVYGRPRLTITGYGASIGCGVEQDFTWKVIGTLLNMCGPDFIADSTVNYSYAMKLGDETKTTSNYAVTGVLRDVRGFNLTKFVTFGWAFDMRIEGPYATGFKQDPNVTEPATYFEILEHVSDNCNHLVFIRPQGETANTKNFEYFRINGNSHLSTHHNIHMFGGHFESHQYGIKFVNAVKNASGRPAVHQCSFNGVLFLENGSGDAALDALTPAASAHLLELDQASCIELNCCRVATTNTTTEAFDSSKHKALIKYSGSALSLVIRGGYFVTAFASVAGSNQNRYTLIDISDHQAGKRAVEFSGRYSMNNFSTAHSTGRVLSGWVSGNRKWIEEVSDDGLEYSWSYSTSSNLTGTPSKMFSIDSTGTFSVNAVKASGISVNDIKSDTVDVSTSFSIGYKNTIPGSRSVDFYGAGTTELTGQVYGNSAGSITVKSTNNIFLSPNGGAGETQATGNIKPTVAASYNIGTASLPWKDGFFQNTITVVSDDDHKPVKDVIPDAVLDIFDSLEIKRWKYDWAIAEKGEDNARWHVGFIAQEIIEAFSNAGLDAQDYAFLVWREWDAEPAQYEQVLVRDAVTDPETGEVISEPVFESRIVSDAINAGARWELVPHEINFILAACQDRRMKRLELLLGKQMD
Physico‐chemical
properties
protein length:935 AA
molecular weight: 101615,72190 Da
isoelectric point:5,03630
aromaticity:0,10160
hydropathy:-0,22406

Domains

Domains [InterPro]
DC_0313
STR
1–901
DC_0313
IPR036388
RBD
772–932
IPR036388
IPR030392
CHP
785–846
IPR030392
cd10144
CHP
785–922
cd10144
IPR030392
CHP
785–933
IPR030392
YP_009903565.1
1 935
Architecture
STR
RBD
STR 1-901 | RBD 902-933 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009903565.1
1 935
Domain Start End Length (AA) Confidence
N-terminal 1 244 244 0,9877
Central domain 245 603 360 0,9846
C-terminal 604 935 331 0,9008
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-244
Central
245-603
C-terminal
604-935

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KP1801
[NCBI] 		2678563 Uroviricota > Caudoviricetes > Drexlerviridae > Webervirus KP1801 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009903565.1 [NCBI]
Genbank nucleotide accession
NC_049848.1 [NCBI]
CDS location
range 25525 -> 28332
strand +
CDS
ATGGCACTATACAGAGAAGGCAAAGCGGCTATGGCCGCAGACGGAACCGTTACCGGGACTGGCACAAAATGGCAATCATCGCTTTCGCTGATTCGCCCCGGCGCGACGATTATTTTTTTGTCGTCACCAATTCAAATGGCCGTCGTAAACAAGGTGGTTAGCGATACTGAAATTAAAGCCATCACCACAAAAGGCGCTGTCGTAGCGTCTACCGACTACGCGATCCTGTTAAGCGACTCGCTAACCGTTGACGGCCTGGCGCAAGATGTTGCGGAAACCCTGCGCTACTATCAGTCACAGGAAACCGTAATTGCTGATGCAGTCGAGTTCTTTAAGGAGTTCGATTTCGAATCGCTGCAAAATCTTGCTAACAAAATTAAGGCAGACTCCGAAGCTGCGGAATCAAGCGCTGCGGCTGCGGCTGCGTCTGAAAGTAAGGCGAAAACTTCAGAGGATAACGCAAAATCTTCTGAAAATTCGGCAAAAAATTCAGAGGTTGCAGCGGAGACTACAAGATACCAAATTCAGCAGATCATTGACAACGCTGGAGATCAGTCAACGCTGGTTGTTCTTGCGCAGCCGGATGGCGCAAGTAAATCAGGATGGAAAAGGGATCCGCTCCACGCAGCAATAAAAACGCAAACTGTTTCAGCCGCACTCAGCGCCATACAGATTTCAGTGTGGGAATTCGCCCATTACATTACTGATAAACCTGATGCGTCTGACCCGAACACATGGGACTGGTCTCCGGCGATACAGGCAGCGTTCGATTACATAGGTACATATGTATCGTTGACAATTAACGGAAAGACTCGCTATGCGTCAGCTAGTCTTAATTTTCCTACCGGATATTATCGATGCTCTAGCCAGGTAATAGCAGATTACTCGTCATACTCTGGATATGTGTATGGAAGACCTCGCCTTACGATTACGGGGTATGGTGCGTCTATTGGTTGCGGTGTAGAGCAGGATTTTACATGGAAAGTTATTGGCACACTGCTGAACATGTGTGGTCCTGATTTTATTGCTGACTCCACTGTTAACTACTCGTATGCAATGAAACTAGGCGATGAAACGAAGACAACCAGTAATTATGCTGTAACTGGTGTTTTACGAGATGTTCGTGGTTTCAATCTGACAAAGTTTGTAACTTTCGGGTGGGCTTTTGATATGCGTATTGAGGGGCCTTACGCAACAGGATTCAAGCAAGATCCTAATGTTACAGAGCCTGCAACATACTTTGAAATACTTGAACATGTATCTGATAACTGTAACCATTTAGTTTTTATCAGACCTCAAGGGGAAACAGCTAATACCAAGAATTTTGAATATTTTAGGATTAATGGTAACTCTCATTTATCCACCCACCACAACATACATATGTTTGGTGGTCATTTTGAGTCTCACCAATATGGTATTAAATTTGTTAATGCTGTAAAAAATGCAAGCGGCAGACCTGCCGTACATCAGTGTTCGTTCAATGGGGTTCTGTTCCTGGAGAATGGAAGTGGTGATGCTGCACTCGATGCTCTTACTCCGGCTGCAAGCGCTCACCTGCTTGAGCTTGATCAAGCCTCCTGCATTGAATTAAATTGCTGTCGTGTTGCTACAACAAACACAACCACTGAGGCTTTTGATAGTTCCAAGCATAAGGCTTTGATTAAGTATTCTGGATCAGCACTTAGCCTTGTCATTAGAGGTGGGTATTTTGTTACTGCATTCGCCAGCGTAGCTGGTAGTAACCAAAATAGATACACACTTATTGATATAAGTGATCATCAAGCAGGCAAGCGTGCAGTAGAGTTTTCAGGGCGTTATTCAATGAATAACTTCTCAACTGCACATAGTACAGGAAGAGTTCTATCTGGTTGGGTATCAGGAAATAGAAAATGGATTGAAGAAGTTTCAGACGACGGGCTTGAGTATTCTTGGTCTTACTCTACCTCTTCAAATCTAACAGGAACACCTAGTAAAATGTTTAGTATTGATAGTACTGGAACATTTTCTGTTAATGCTGTCAAGGCGTCGGGGATTTCTGTTAATGATATAAAATCAGATACAGTTGATGTTTCTACTTCCTTCAGTATTGGTTATAAAAACACTATACCAGGTAGTCGCAGCGTAGATTTCTATGGTGCTGGAACAACAGAACTTACTGGTCAGGTTTATGGTAACTCCGCTGGTAGTATAACCGTAAAATCTACAAATAATATCTTCTTATCCCCTAACGGTGGGGCAGGTGAGACTCAAGCAACAGGAAATATAAAGCCAACCGTAGCAGCATCATATAATATTGGCACTGCGTCACTGCCGTGGAAAGATGGTTTTTTCCAGAACACAATAACAGTTGTCTCTGACGACGATCACAAACCAGTAAAGGATGTTATCCCTGATGCTGTTCTGGATATTTTTGACAGCCTAGAGATTAAGCGTTGGAAATATGATTGGGCCATTGCTGAGAAGGGCGAGGATAATGCGAGATGGCATGTTGGTTTCATTGCTCAGGAAATAATTGAAGCATTCTCTAATGCTGGTTTAGATGCTCAGGATTATGCTTTCCTTGTATGGCGCGAATGGGACGCAGAACCAGCTCAGTATGAGCAGGTTCTTGTTAGAGACGCAGTAACTGACCCGGAAACTGGTGAAGTGATATCTGAACCAGTATTCGAGTCACGCATTGTCAGCGATGCAATAAATGCAGGTGCGAGATGGGAGCTTGTTCCACATGAGATCAATTTCATCTTAGCCGCGTGTCAGGATAGAAGGATGAAACGACTTGAGTTATTACTGGGTAAGCAAATGGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cca6d3b780a66f51e1643ff36c1b2b02327ab8a20861f89c32fd912b25daba1f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6969
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of bacteriophage infecting extended spectrum-lactamase-producing clinical isolates of Klebsiella pneumoniae and evaluation of therapeutic efficacy in vitro Wintachai,P., Naknaen,A., Pomwised,R. and Smith,D.R. 2020-07-16 — GenBank