Protein

View in Explore
Genbank accession
QRI46303.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MQSINQPQKILVPFAQNDSAKVEIPVTTTSPGRFSQTLGSPPETALPPESGGTPPQLPDFNGAMNQQSRLAWWMMAGGRFAFDSTWANNTYVNGYPRGAVLPAAIGAGLVGMGEWYNNAEANTADPDVNGAGWVPGYHYGVTALTGQTGGTLTLSPALAAKRTITIAGTLTSNLVLVLPAWVYTWRIVNNTGGAYTVTVKNAATTGVVIPQNGVSTTVHCDGTQVSFDSPNIPAAVLSTQPMQLGQATGRLLAVRRFAVAGATTYTPTTGTNTVIVEVVGAGASGAGTVAALSGQAAAGGGGGGGAYAKARIVSGFAGVTITVGAPGVSAAPGNAGQAGGASSFGSLVVCPGGAGGPQGQGSSSANYSAPGLGAAAPTFGGSADVIMAASGAAGSPGLLFSSSIVISGNGANTPYGAGGGGAGSSTAGQTGTGLSAGGQGSGGGGGFSTSGGSPGSGGSGGGGLVLVWEYA
Physico‐chemical
properties
protein length:471 AA
molecular weight: 45391,80390 Da
isoelectric point:6,71959
aromaticity:0,06794
hydropathy:0,12378

Domains

Domains [InterPro]
DC_1179
STR
1–435
DC_1179
IPR049304
STR
260–467
IPR049304
QRI46303.1
1 471
Architecture
STR
STR 1-467 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage X2
[NCBI] 		2511833 No lineage information
Host Xanthomonas oryzae pv. oryzae
[NCBI] 		64187 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas oryzae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QRI46303.1 [NCBI]
Genbank nucleotide accession
MW435566.1 [NCBI]
CDS location
range 670 -> 2085
strand +
CDS
ATGCAATCGATCAATCAGCCGCAAAAAATCCTCGTACCCTTCGCCCAAAACGATAGTGCGAAGGTCGAGATTCCGGTGACGACCACGAGTCCGGGGCGTTTTTCGCAGACCTTAGGCTCGCCGCCGGAGACTGCGCTGCCGCCCGAGTCAGGCGGCACCCCGCCGCAGCTGCCGGATTTTAACGGCGCAATGAATCAACAGTCGCGCCTTGCCTGGTGGATGATGGCCGGCGGTCGTTTTGCGTTCGACTCGACCTGGGCCAATAACACCTACGTCAACGGCTATCCACGTGGTGCGGTGCTGCCCGCGGCAATCGGTGCCGGGCTGGTCGGCATGGGCGAATGGTACAACAACGCCGAAGCTAACACGGCCGATCCGGACGTCAACGGCGCAGGTTGGGTGCCGGGCTATCACTACGGCGTGACGGCGCTGACGGGCCAGACCGGCGGCACGCTGACACTGTCACCGGCGCTGGCGGCTAAGCGCACGATCACAATCGCCGGCACGCTGACATCTAATCTCGTCCTTGTCCTGCCGGCCTGGGTCTACACCTGGCGCATCGTCAACAATACCGGTGGCGCGTACACGGTCACCGTGAAAAATGCAGCGACGACCGGCGTGGTCATCCCGCAAAACGGCGTGTCGACGACCGTACATTGCGACGGCACGCAGGTCTCGTTCGACTCGCCTAACATCCCGGCCGCGGTGCTGTCCACGCAGCCAATGCAGCTCGGTCAGGCGACAGGTCGTTTGCTGGCCGTGCGCCGCTTTGCCGTCGCCGGCGCGACGACCTACACACCGACAACCGGTACTAACACCGTGATCGTCGAGGTCGTGGGCGCAGGCGCGAGCGGGGCCGGTACCGTGGCCGCGTTGAGCGGGCAAGCCGCCGCAGGTGGCGGTGGCGGTGGAGGCGCCTACGCTAAGGCACGCATCGTGTCGGGCTTTGCGGGCGTGACGATCACCGTCGGCGCGCCGGGCGTATCGGCTGCACCGGGTAACGCAGGTCAAGCCGGTGGCGCATCGAGCTTTGGTAGCTTGGTCGTGTGTCCGGGCGGTGCGGGCGGCCCACAAGGCCAGGGCAGTTCGTCGGCGAACTACTCCGCCCCGGGTCTAGGTGCCGCGGCGCCGACCTTTGGCGGTAGCGCCGACGTGATCATGGCCGCAAGCGGCGCGGCAGGCAGCCCGGGGCTGTTATTCAGTTCGAGCATCGTCATCAGCGGCAACGGCGCTAACACGCCCTACGGTGCGGGCGGTGGTGGCGCTGGGTCGAGCACTGCCGGTCAGACTGGTACGGGGTTGAGCGCCGGCGGTCAGGGTAGCGGCGGCGGCGGCGGGTTCAGTACGTCGGGCGGTAGCCCTGGTAGCGGCGGATCCGGTGGTGGTGGCCTCGTACTCGTTTGGGAATACGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d628b0a8bb63e3f7b92e02db8afbcd0e2bd7bce2aa7382f2f4827b4fdd6c614f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9009
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of five new OP2 related Myoviridae Bacteriophages infecting Xanthomonas oryzae pv. oryzae Ogunyemi,S.O., Chen,J., Wu,X., Wang,L., Masum,M.M.I., Yan,C., An,Q., Li,B. and Chen,J. 2018-10-25 — GenBank