Protein

Genbank accession
QEM40851.1 [GenBank]
Protein name
matrix-binding protein
RBP type
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLSLLDKTVRTAKWHGKPLPETIKASVKETLNGDFVLNFTYPITDSGLFRELKEDYLVRSPVPVLGHQLFRIKKVIEGDTSLEVVAYHISDDIMTRLVSQFRCEQVPCATALSSMVMASKSPLGDFSFTSDIVKNRTYTTDKEQTLYSSLMDGKHSILGTWEGELVRDNLALTIKGERGQDRGVVISTHYNLKKYQRTKESTQIITRIHATSSFKQEGQDRETVLQVTVDSPLINSYPFINEVTYTNNNLKTRQELIEWASSKFRLEGIDKPKDAIIIEAFELDGQTVHLGDTVTLKSKLHGIDVRKKAIAYDYDPLAKNYRSITFDDKASIGTGKTGGSITTLANNLIDGNKRSEDVAVEIALENANKAFDAEFEKRQVAIDNAIEQAQSHGEVYADRLKASIDNELSSIHQQMRQHEEEQQRTTRDLMAKAGVNTNLATEAKQKAEQAQTGATEALRRAEQAKLDAIQEANRLTSTERSQTELKIATAKSQAISEASRLVDVAKALLGGQLATVSTNLSQTKEDIKLLASKQLVDSLTGRVTGAESMIQVQADQISQRVKTSDFNQAKQRIETAESTITQLGNRITTEISQVDSKIPTSLDGLNLMTGTRDWSNKGNAWHLGNNWSTETENFRGLVVRSTQAGFNGSHQNIVVKAGDVITFSFYAKANQPLSSIKVSAIWTGSSVYRAPVARVRESDDIISVTSDWKRYWKTVHVLSDGSLQFRTEYNASTIPNGNKFYVAGLKVAKTSLDTGYSENPADIAGELTTQRTLITQTASGVEQVSTRLTEASGKISSSETQIRQLVSDVSSKVSQTDFNNLKRTVEGHTTSIQQTQQSILLKADKTVLEGVKTTADNALAKANTNASQITQTKADLRIANDSISQKVAKTDFNNLSGRVASAETTIRTQAGQIEQRLTSTQVESAINSKGYQTKSQVDSNITGRGYLTSSSLQPYATTTSVQNLVRTTSDSFTQRISQTESRIPTSVSHRNLIAGTSDRWGAYQTINASSNWIASLGRVQFGDGSGIYVGSKVHLYVHISADEITFDPAVTTRSMKLQGPILDSQNVWTWTNWNLYHPFYNKWSSNLTTGNNYRLIKLTATVTQEMYQHSKGFELQVRIDGVKTGKFHVRALMISTGDIFPDYWTPSLDDFTTVNAFHEVRDTVSSHARTIGDHTNQISQVVQTANGIVTRVGNLETSRATTATVTAIQTQVSTLAGAWSVRNLTSAGTVLSQLNLNKDGTVKIDGKLVQITGTTYIQDGVIASGKIASLDAGKITSGIISAARIGAEAITADKLKVDQAFFTKFMATDAYLKQLFAKSAFITQVQSVTLSANKISGGILSAINGAMKINLSLGNIKFYTNSPSISREVSGYPHQWVSFETGTSNGKPCGVTIIGSNRWNNWNANDGGFVGIRAWNGTDTDQIDVVGDKVRLASAPYTNPDGWEIVTLPNRLSIDAFKASDRPSSILNIGDIRIYRNGTTYVSLKDVLHQFNHNFKHLVNITGRGDVILTWDTIK
Physico‐chemical
properties
protein length:1515 AA
molecular weight: 166463,54400 Da
isoelectric point:8,86126
aromaticity:0,06799
hydropathy:-0,38370

Domains

Domains [InterPro]
IPR007119
27–327
IPR007119 Coil Coil Coil IPR012892
IPR010572
131–328
IPR010572
QEM40851.1
1 1515
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage phi-SC181
[NCBI] 		2607969 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEM40851.1 [NCBI]
Genbank nucleotide accession
MK359990 [NCBI]
CDS location
range 47125 -> 51672
strand +
CDS
GTGCTATCATTATTAGACAAAACGGTTCGAACGGCAAAATGGCATGGGAAACCACTCCCAGAGACTATAAAAGCAAGCGTTAAAGAAACCTTGAATGGGGATTTTGTCCTGAATTTTACCTATCCAATCACAGACAGCGGTCTATTTCGAGAGCTAAAAGAGGACTACCTTGTTCGTAGTCCAGTTCCAGTATTGGGACACCAGTTGTTTCGGATAAAGAAAGTAATCGAAGGAGACACCAGTCTTGAAGTTGTGGCCTATCACATATCAGATGACATCATGACTAGGTTGGTATCTCAATTTAGGTGTGAACAGGTTCCCTGTGCAACAGCTCTATCAAGCATGGTCATGGCAAGCAAGTCTCCACTGGGAGATTTTTCATTTACCAGTGACATTGTCAAGAACAGAACCTATACAACGGACAAGGAACAGACGCTGTACTCCAGCCTGATGGATGGTAAACATTCTATTCTTGGAACTTGGGAGGGTGAACTGGTTCGTGATAACCTTGCCCTAACTATAAAGGGTGAGCGGGGACAAGACCGTGGGGTAGTCATCTCTACTCACTACAATTTGAAGAAGTATCAACGAACCAAAGAAAGTACACAGATTATCACTCGTATCCATGCCACTTCAAGCTTTAAACAAGAGGGGCAGGATAGGGAAACTGTACTTCAAGTCACAGTAGACAGTCCGTTGATAAACTCCTATCCTTTCATCAATGAAGTAACCTATACCAATAATAATCTCAAAACTCGACAGGAGTTAATAGAGTGGGCTAGTAGCAAGTTTCGCTTAGAGGGAATTGATAAGCCAAAAGACGCCATCATCATTGAGGCATTTGAGTTAGATGGTCAAACTGTTCATCTAGGCGATACAGTGACTTTAAAAAGCAAGCTACACGGCATTGATGTGAGGAAGAAAGCCATCGCTTATGATTATGATCCTTTAGCTAAGAATTACCGCTCTATCACTTTTGATGATAAGGCAAGTATTGGCACAGGTAAAACTGGTGGGAGCATAACTACACTAGCAAATAATCTCATTGATGGGAATAAGCGGAGTGAGGATGTTGCCGTTGAAATTGCTCTTGAGAATGCCAATAAAGCCTTTGATGCAGAATTTGAGAAACGTCAAGTAGCCATTGATAACGCTATTGAACAGGCTCAAAGTCATGGGGAGGTTTATGCGGATCGATTAAAGGCCAGCATTGATAATGAACTTAGTTCTATTCACCAACAGATGCGGCAACATGAAGAGGAGCAGCAACGTACAACTCGTGATTTAATGGCAAAGGCTGGGGTAAATACCAACCTAGCAACAGAAGCCAAACAAAAGGCGGAACAGGCTCAAACTGGGGCAACTGAAGCTCTCAGAAGGGCAGAACAAGCCAAACTTGATGCCATTCAAGAAGCTAACCGATTGACTTCAACGGAGCGTAGCCAAACAGAGTTAAAGATTGCGACAGCAAAATCACAAGCTATCTCTGAAGCCAGTCGATTGGTTGATGTAGCAAAAGCTCTATTAGGTGGGCAGTTGGCAACTGTAAGTACCAATCTCTCACAAACCAAGGAGGATATAAAACTTCTTGCGAGTAAGCAACTGGTGGATAGTCTGACTGGTCGAGTAACGGGTGCAGAATCCATGATTCAAGTGCAAGCAGACCAAATTTCCCAGCGTGTAAAAACCAGCGATTTTAACCAAGCAAAACAGAGAATCGAAACTGCAGAGTCAACGATTACGCAATTGGGGAATCGCATAACAACTGAAATCAGTCAAGTGGATTCGAAAATTCCAACTAGCCTAGATGGCTTAAATTTGATGACTGGTACTCGTGATTGGTCGAATAAAGGAAATGCCTGGCATTTAGGAAACAACTGGTCTACCGAAACAGAGAATTTCAGAGGACTGGTTGTTCGTTCAACCCAAGCAGGGTTCAACGGAAGTCATCAAAATATTGTTGTGAAAGCTGGAGATGTCATTACTTTTAGCTTTTATGCCAAAGCGAATCAGCCACTTTCTTCCATCAAAGTTTCAGCGATTTGGACTGGTTCGAGTGTCTATCGTGCTCCAGTCGCAAGAGTGAGGGAATCGGACGATATTATATCTGTCACCAGTGACTGGAAACGCTACTGGAAAACAGTTCATGTCTTATCTGATGGCTCACTCCAATTTCGAACGGAGTACAATGCAAGCACAATCCCAAATGGGAATAAATTCTATGTTGCAGGATTGAAAGTCGCAAAGACCTCACTAGACACAGGTTATTCAGAAAATCCAGCAGATATAGCTGGTGAATTGACCACCCAACGGACACTCATCACTCAAACGGCTTCTGGTGTAGAGCAGGTTTCTACAAGATTAACCGAGGCGAGTGGAAAGATTTCTAGTAGTGAAACACAGATTCGACAATTAGTTTCGGATGTATCCTCAAAGGTCAGTCAGACGGATTTCAATAACTTGAAACGAACTGTTGAGGGACATACTACATCCATCCAACAGACGCAACAATCTATTTTGCTTAAGGCTGATAAGACAGTTCTTGAGGGGGTCAAAACAACCGCTGACAATGCCTTGGCTAAGGCCAATACAAACGCAAGTCAGATTACTCAAACAAAGGCAGATTTAAGGATTGCCAATGACTCCATTTCACAGAAAGTCGCAAAGACTGATTTTAATAACTTGAGCGGTCGAGTAGCAAGTGCAGAAACCACTATCCGAACACAGGCTGGGCAAATTGAACAACGACTAACAAGTACGCAAGTTGAATCTGCCATTAACTCAAAAGGCTACCAAACCAAGTCTCAGGTAGATTCCAATATTACGGGTCGTGGCTATCTTACGAGCAGTTCACTACAACCCTATGCGACAACAACTAGTGTACAGAATTTGGTTAGAACCACCTCTGATAGTTTTACCCAGCGAATCAGTCAAACGGAAAGCAGAATCCCTACCTCAGTTTCGCATCGCAACTTGATAGCTGGTACTTCGGATAGATGGGGTGCTTATCAGACGATAAATGCCAGTAGTAACTGGATAGCCTCTTTAGGAAGAGTTCAGTTTGGAGATGGAAGTGGTATCTATGTTGGGTCAAAAGTGCATTTATATGTTCATATCTCAGCGGATGAGATTACCTTTGACCCGGCGGTGACGACTCGTTCTATGAAACTCCAAGGTCCAATCTTGGATAGTCAAAATGTTTGGACATGGACCAACTGGAATTTGTATCACCCTTTCTACAATAAATGGAGCAGCAATCTGACGACGGGCAACAACTATCGCTTGATAAAACTGACCGCCACAGTCACTCAAGAGATGTACCAACATTCAAAAGGTTTTGAACTTCAAGTCAGAATTGATGGAGTTAAAACAGGTAAGTTCCATGTGAGAGCTTTAATGATATCAACCGGTGATATCTTTCCAGACTATTGGACACCGTCATTAGACGACTTTACGACAGTGAACGCCTTTCATGAAGTGCGGGATACTGTAAGTAGTCACGCTCGGACAATTGGAGATCACACCAATCAAATCAGTCAGGTTGTTCAAACGGCTAATGGGATTGTGACACGAGTTGGCAATCTAGAAACAAGTCGAGCGACAACTGCCACAGTAACTGCCATTCAAACGCAGGTTTCAACACTTGCAGGGGCGTGGTCGGTTCGAAATCTGACCAGTGCAGGGACAGTCCTGAGTCAGCTCAATCTTAATAAGGATGGTACAGTCAAAATCGATGGAAAACTCGTTCAAATAACAGGCACGACCTATATCCAAGATGGTGTGATTGCGAGCGGTAAGATTGCCAGTCTTGATGCAGGCAAGATTACGTCAGGCATCATCTCAGCAGCTCGAATTGGAGCAGAAGCCATCACTGCGGATAAGTTAAAGGTTGATCAAGCATTCTTTACCAAGTTTATGGCAACAGATGCCTATCTCAAGCAGTTGTTTGCCAAATCAGCCTTTATAACCCAAGTGCAGTCAGTAACCCTATCTGCCAACAAAATTTCAGGCGGTATTTTGTCAGCCATCAACGGAGCTATGAAAATCAATCTTTCACTTGGGAACATCAAGTTCTATACCAACTCTCCATCAATTTCTCGTGAGGTTAGTGGATATCCTCACCAATGGGTTTCCTTTGAGACAGGAACGTCAAACGGGAAACCATGTGGGGTAACCATTATCGGTTCGAATCGATGGAACAACTGGAATGCCAATGACGGTGGCTTTGTAGGGATTCGAGCATGGAACGGTACTGATACTGACCAAATTGATGTGGTAGGTGATAAAGTTCGCTTAGCAAGTGCTCCATATACCAATCCAGATGGGTGGGAGATTGTAACGTTGCCTAACCGACTGAGTATTGACGCTTTCAAAGCATCCGACCGACCAAGTTCCATCTTGAATATCGGAGATATCCGCATCTATCGAAATGGGACAACCTATGTCAGCTTGAAAGATGTACTTCATCAATTCAATCACAATTTTAAACACTTAGTAAACATCACAGGTCGAGGTGACGTCATCTTGACATGGGATACGATTAAATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
0ceb848348506e94349459d1791e84c6dfa10133fcdda9720de11094ea46ccb4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7159
Evidence 0,7159
Download PDB

Literature

Title Authors Date PMID Source
Different genetic elements carrying optrA in three Streptococcus suis isolates Li,D., Shang,Y. and Du,X. 2019-07-17 — GenBank