Protein

View in Explore
Genbank accession
XCO41025.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRCLSVSASGLSPRPAVSSTLGSLAQRTLRTLWHRKRWKHGWRATSTRWTSASTTCLTVTHTYRVSSVVNQKLKEDQMALVSQSIKNLKGGISQQPEILRYPEQGSLQVNGWSSETEGLQKRPPMVFIKSLGGRGYLGEDPYIHLINRDEYEQYYAVFTGNDVRVFDLSGYEYQVRGDRSYVTVNNPKDNLRMVTVADYTFIVNRTRQVRESQNLTNGGTFRDNVDALINVRGGQYGRKLEVNINGVWVSHQLPPGDNAKEDPPKVDAQAIAEALATLLRTAHPTWTFNVGTGFIHCVAPANTTIDIFETKDGYADQLINPVTHYVQSFSKLPLNAPDGYMVKIVGDTSKTADQYYVKYDKSQKVWKETVGWNISIGLDYTTMPWTLVRAADGNFDLGYHDWKDRRAGDEDTNPQPSFVNSTITDVFFFRNRLGFISGENIVMSRTSKYFEFYPPSVANYTDDDPLDVAVSHNRVSVLKYAVSFAEELLLWSDEAQFVLSANGVLSAKTAQLDLTTQFDVSDRARPYGIGRNIYYASPRSSFTSIMRYYAVQDVSSVKNAEDMTAHVPNYIPNGVYSINGSGTENFACVLTKGAPSKVFIYKFLYMDENIRQQSWSHWDFGDGAEVMAANCINSTMYMLMRNAYNVWIAAVDFKKESTDFPFEPYRFHVDAKRSYHISETAYDIETNQTVVNVKDIYGASFAKGTVAICESDGKITEYEPTGSSWDSTPDIRISGDISGKDIVIGFLYDFQYVFSRFLIKQEQNDGTTSTMDSGRLQLRRAWVNYQDTGAFTVSVDNGNREFNYLVNARVGSTGLRLGQKATTTGQYRFPVTGNALYQKVSLSSFNASPVSIIGCGWEGNYTNRASGI
Physico‐chemical
properties
protein length:868 AA
molecular weight: 97495,86020 Da
isoelectric point:6,56521
aromaticity:0,11866
hydropathy:-0,40841

Domains

Domains [InterPro]
IPR058003
TTP
70–868
IPR058003
IPR058003
TTP
78–868
IPR058003
XCO41025.1
1 868
Architecture
TTP
TTP 70-868
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO41025.1
1 868
Domain Start End Length (AA) Confidence
N-terminal 1 217 217 0,6892
Central domain 218 422 206 0,2230
C-terminal 423 868 445 0,1950
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-217
Central
218-422
C-terminal
423-868

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146048
[NCBI] 		3232227 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO41025.1 [NCBI]
Genbank nucleotide accession
PP889497 [NCBI]
CDS location
range 24698 -> 27304
strand +
CDS
ATGAGATGCCTGAGTGTTTCCGCCAGTGGATTGTCACCAAGGCCAGCCGTCAGTTCAACTCTCGGTTCTTTGGCGCAGAGGACGTTGAGAACTCTCTGGCACAGGAAGAGATGGAAGCACGGATGGCGTGCAACGAGTACGAGATGGACTTCGGCCAGTACAACATGCTTGACGGTGACGCATACGTACAGGGTCTCATCGGTCGTTAATCAGAAACTTAAGGAGGACCAAATGGCTCTCGTATCACAATCAATCAAGAACCTCAAGGGAGGCATTAGCCAACAGCCTGAAATCCTACGGTACCCAGAGCAGGGTTCGCTTCAGGTCAACGGTTGGTCCTCCGAGACTGAGGGTCTCCAGAAGCGACCACCCATGGTGTTCATCAAGTCCTTAGGAGGCCGTGGGTATCTTGGGGAAGACCCCTACATCCACCTCATCAACCGTGACGAATACGAGCAGTATTACGCCGTGTTCACAGGGAATGACGTTCGGGTATTCGACCTGTCCGGCTATGAGTATCAGGTCCGTGGCGACCGCTCTTACGTGACCGTCAACAATCCTAAGGATAACTTGCGGATGGTCACCGTGGCCGACTACACGTTCATCGTGAATCGCACAAGACAGGTCCGGGAGAGTCAGAACCTCACCAATGGAGGGACCTTCAGGGATAACGTGGACGCCCTCATTAACGTTCGTGGTGGGCAGTATGGTCGCAAGCTCGAAGTGAACATTAACGGCGTGTGGGTTAGCCACCAGCTCCCTCCGGGTGACAACGCTAAGGAGGACCCACCAAAGGTCGACGCACAGGCTATCGCTGAGGCCCTAGCGACCCTTCTCAGAACGGCACACCCTACGTGGACGTTCAACGTGGGAACAGGGTTCATTCACTGCGTTGCTCCTGCTAATACCACCATTGACATATTCGAGACAAAGGATGGTTATGCTGACCAGCTAATCAATCCGGTAACCCATTACGTCCAGAGCTTCTCTAAGTTGCCTCTGAACGCGCCAGATGGGTACATGGTGAAGATTGTCGGAGATACGTCAAAGACCGCCGACCAGTATTACGTTAAGTACGACAAGAGTCAGAAGGTCTGGAAGGAAACTGTTGGATGGAACATCTCGATAGGGCTGGATTACACCACTATGCCTTGGACCCTTGTCAGGGCAGCTGACGGAAACTTTGACCTAGGGTATCACGATTGGAAGGACCGACGTGCTGGCGACGAGGATACCAACCCTCAGCCATCCTTTGTGAACTCTACGATAACTGACGTGTTCTTCTTCAGGAACCGCTTAGGGTTCATCTCTGGGGAGAACATTGTGATGTCCCGTACCAGCAAGTACTTCGAGTTCTACCCACCGTCAGTGGCCAACTACACGGACGATGACCCGCTGGATGTTGCTGTGAGTCATAACCGAGTGTCGGTCCTAAAGTACGCTGTGAGCTTCGCTGAGGAGCTTCTACTGTGGTCTGATGAGGCACAGTTCGTCCTGTCGGCCAACGGTGTGTTATCCGCTAAGACTGCACAGCTGGACCTGACCACCCAGTTCGACGTGTCAGACCGTGCTCGTCCTTATGGTATCGGTAGGAACATCTACTATGCGTCTCCTCGCAGTTCCTTTACGTCCATCATGCGCTACTACGCGGTACAGGATGTAAGCTCTGTGAAGAACGCAGAGGACATGACGGCCCACGTCCCGAACTACATCCCGAACGGTGTGTACAGCATCAACGGGTCTGGTACGGAGAACTTCGCGTGTGTGCTAACCAAGGGTGCCCCGAGCAAGGTGTTCATCTACAAGTTCCTCTACATGGATGAGAACATCCGGCAGCAGTCGTGGTCCCACTGGGACTTCGGTGATGGTGCGGAGGTGATGGCAGCAAACTGTATCAACTCGACGATGTACATGCTGATGCGGAATGCCTACAACGTGTGGATAGCTGCGGTGGACTTCAAGAAGGAATCGACCGACTTCCCATTCGAGCCTTACCGTTTCCACGTGGATGCCAAGCGCTCTTACCACATCTCGGAGACAGCGTATGACATCGAGACAAACCAGACGGTAGTCAACGTCAAGGACATCTACGGTGCGTCGTTCGCCAAGGGTACCGTGGCAATCTGCGAGAGTGACGGTAAAATCACCGAGTACGAGCCTACGGGTTCCTCTTGGGATTCAACCCCAGACATCCGCATTAGCGGTGACATCTCAGGTAAGGACATTGTCATCGGGTTCCTTTACGACTTCCAGTATGTGTTCAGTCGGTTCCTCATTAAGCAGGAGCAGAACGACGGCACAACGTCGACTATGGACTCTGGTCGTCTACAGCTGCGCAGAGCGTGGGTGAACTATCAGGACACTGGTGCGTTCACTGTGAGCGTCGATAATGGCAACCGTGAGTTCAACTATCTGGTCAACGCCAGAGTGGGTTCTACCGGCCTACGTCTGGGCCAGAAGGCCACAACTACTGGTCAATACCGCTTCCCTGTGACGGGTAACGCCCTGTACCAGAAGGTGTCCTTGAGTTCCTTCAACGCTTCCCCAGTGTCAATCATTGGGTGTGGCTGGGAGGGGAACTATACCAACCGCGCCAGCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
353dd1bb611e067abbd8634f3e0044a61ab1673991998cc1e11daaea95f5327d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2972
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank