Protein

View in Explore
Genbank accession
XYS96764.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPNIMKPTGINAIWSENGQKVDPGAVKVGLGWVTELPPYQTANFIEYKQDLFNAHVNQHGIPEWDSITEYQGNLSYTQGSNGVIYKCLRTHTDKIPTDPLNITSGYWRVAFEDAGEAAKVQANLDQHITNYNTLSGIGNVVIARQNLSVYSKAEGDARYAMRHGNGSNVFSVAPATQPTHAIPLSQLSTLVPPATETVAGVMAVATTIETEAGANDTKAVSPLKAAQVYLKKKDNLSGLSNVTAARANLGLSDTATMPSSTFLKAGSNLADVPNKALARSNLGITSSATQPETYFLRSAQNLADVPNKAQARVNLGLTGMATTDPAAVMMKADNLAGLANTATARSNLGLGTASTRNTGDFLSSGDNLSDLTNVQAARNNLGLKGAATLDVWGLPANTTAMDFQSSQSDISRGWARLPNGLLLQWGTGPGLSDDTRTNIQLPVPARILNVQVTVMGTFNNSIGPGAFMTDMWSNTGFRVSCNWGNWSYPFNWFAITSTL
Physico‐chemical
properties
protein length:499 AA
molecular weight: 53088,90680 Da
isoelectric point:6,60295
aromaticity:0,07214
hydropathy:-0,21904

Domains

Domains [InterPro]
DC_0043
STR
1–319
DC_0043 DC_0362
G3DSA:2.60.40.3940
RBD
406–495
G3DSA:2.60.40.3940
IPR054075
RBD
416–495
IPR054075
XYS96764.1
1 499
Architecture
STR
RBD
STR 1-319 | RBD 321-499
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_ZGC
[NCBI] 		3436855 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYS96764.1 [NCBI]
Genbank nucleotide accession
PV752213.1 [NCBI]
CDS location
range 2964 -> 4463
strand +
CDS
ATGCCAAACATTATGAAGCCTACGGGTATTAACGCTATCTGGTCTGAAAACGGCCAGAAGGTTGACCCGGGTGCTGTAAAAGTTGGGCTTGGATGGGTGACAGAACTACCTCCCTACCAAACTGCCAACTTCATTGAATACAAGCAGGACTTGTTCAACGCACACGTTAACCAGCATGGTATCCCCGAATGGGATAGCATCACGGAGTATCAGGGCAACCTGAGCTACACTCAGGGTTCTAATGGTGTGATCTATAAGTGCCTGAGAACGCACACTGATAAGATTCCAACCGATCCCCTGAACATCACTTCAGGATATTGGCGAGTAGCGTTCGAGGATGCCGGAGAAGCTGCAAAGGTTCAAGCCAACCTAGACCAGCACATCACCAACTACAACACCCTCTCTGGAATCGGCAACGTAGTTATTGCAAGGCAGAACCTGAGTGTGTATAGTAAGGCCGAAGGCGATGCACGTTATGCCATGCGACACGGCAACGGGTCTAACGTCTTCAGCGTCGCTCCCGCAACACAGCCAACTCACGCGATCCCGCTGAGCCAGCTATCGACTCTCGTTCCTCCTGCGACCGAGACTGTAGCCGGGGTTATGGCAGTTGCTACGACTATCGAGACAGAAGCTGGAGCCAATGATACCAAGGCTGTGAGTCCGCTCAAGGCCGCACAGGTGTATCTGAAGAAGAAAGACAACCTTTCCGGTCTGTCTAACGTCACTGCCGCAAGAGCTAATCTAGGACTGTCGGATACAGCGACTATGCCTTCTTCTACATTCCTGAAGGCAGGTAGCAATCTGGCAGATGTACCTAACAAGGCGTTGGCAAGATCAAATCTTGGAATTACAAGTAGTGCTACCCAGCCGGAAACCTATTTCTTGAGGAGCGCTCAGAACCTCGCAGATGTACCTAACAAGGCACAAGCTAGAGTCAACCTAGGCCTCACTGGGATGGCTACAACAGACCCTGCGGCGGTTATGATGAAGGCAGACAACCTTGCTGGATTGGCTAACACTGCTACCGCTCGGTCCAACCTAGGGCTAGGCACAGCTTCTACTAGAAATACAGGAGACTTCCTGTCGTCTGGGGATAACCTGTCCGACCTCACGAATGTCCAAGCAGCTAGAAACAACCTAGGGTTGAAGGGAGCGGCTACGCTCGATGTATGGGGTCTTCCTGCGAATACAACTGCCATGGACTTCCAGTCCAGTCAGTCGGATATTTCCAGAGGATGGGCTCGACTACCAAACGGCCTTCTGCTACAATGGGGAACTGGTCCCGGTCTGTCTGATGACACAAGGACGAATATTCAACTCCCTGTTCCTGCCCGCATCTTGAACGTGCAAGTGACTGTAATGGGGACGTTTAACAACTCCATCGGCCCGGGCGCTTTCATGACGGATATGTGGAGTAACACGGGGTTCAGAGTTAGCTGCAACTGGGGTAACTGGTCTTATCCGTTCAACTGGTTTGCTATCACTTCAACCCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
28a8079c3a4dc73e8fef8c0d577e44196ce450eed01cdbb72942e80ffc98d9be
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7886
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel pseudomonas aeruginosa phage vB_PaeM_ZGC Zhang,L. 2024-11-16 — GenBank