Protein

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Genbank accession
ADQ12741.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MILEGVYPSFLKGVSQQTPQERSDGQLGAQLNLLSDAVTGLRRRGGVKFQAKLTGIPNSSYIRLIDINGVNYIMIVDTVTGTLKIYNFDGSLLKAHQTDYLKASNGKASIRSTVSRNNCFVLNTEQVITKTPTGGTNPIPNPSTMGYISIRSGQFSKMYSVDIKSGSYTLSFGVGTSGSEAWQATPEWVATEMENRIKEDTTLNARYTVVREGSTVALKAKSAIDTNLLVIESGTGSTYIQTSNSSRVQGKQDIIANLPNILDKYIIAVGTVGNSAYYQYNATTSTWKECGVYEAPYKFTNEPIYWYFDDTDTIQVKSLDIQPRTAGDDDNNPLPKFVDFGITGISAYQSRLVLLSGSYVNMSATADFNVYMRTTVEELQDDDPIEVSSTALSAAQFEYAVPYNKDLVLLAQNQQAVIPANSTVLTPKTAVIYPSSKANISMASEPQVVSRSLYYTYQRGTDYYQVGEMIPNAYSDAQYYAQNLADHIPLYATGVCTSITGSTTDNMAVFSSDQKELLVHQYLWAGEDRPLMSFHKWELPYDVLHVQFLQEYLVLFMDVGDDLVVGTINVQLNQLDNKPIPFLDIYQYVDIVDGEGTLPEFLPAGELVAAVYSSETMRHAKVQYEIEGTKIKCQFNGRIYLGVPYESSLTLTPPFVKDDKGRVVAGSNSTVIDLTMTFKSTGEFEYHVSDTYGDVFDGETSAQAWSETQLGYTRVNTVSDVKFPCGTLLSSTEFSIRTKGTTELNIISASYNIRVPNRGRRRL
Physico‐chemical
properties
protein length:763 AA
molecular weight: 84402,75900 Da
isoelectric point:4,95417
aromaticity:0,10223
hydropathy:-0,23958

Domains

Domains [InterPro]
DC_0058
STR
1–763
DC_0058
IPR058003
TTP
7–761
IPR058003
ADQ12741.1
1 763
Architecture
STR
STR 1-763
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADQ12741.1
1 763
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,9768
Central domain 138 338 202 0,1307
C-terminal 339 763 424 0,2170
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-338
C-terminal
339-763

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage phiAB1
[NCBI] 		691318 Uroviricota > Caudoviricetes > Autographivirales > Beijerinckvirinae > Friunavirus
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADQ12741.1 [NCBI]
Genbank nucleotide accession
HQ186308 [NCBI]
CDS location
range 25741 -> 28032
strand +
CDS
ATGATTCTTGAGGGAGTGTACCCGTCATTCTTGAAAGGTGTATCACAGCAAACACCTCAAGAGCGTAGTGACGGACAATTAGGCGCACAGCTTAATTTATTATCTGATGCTGTAACAGGTTTACGTAGACGTGGTGGGGTTAAATTCCAAGCTAAGTTGACAGGTATTCCGAATAGCAGTTATATACGTTTAATTGACATCAACGGTGTTAATTATATTATGATCGTAGATACTGTTACAGGTACTTTAAAGATTTATAATTTTGATGGTTCCTTACTTAAAGCACATCAAACAGATTATCTTAAAGCCTCCAACGGTAAGGCTAGTATCCGTAGTACAGTCTCACGTAATAATTGCTTTGTATTAAATACAGAACAAGTTATTACTAAGACACCTACAGGCGGTACTAACCCTATACCTAATCCAAGTACAATGGGTTATATCAGTATTCGTTCTGGTCAGTTCTCTAAGATGTATTCAGTAGACATCAAGTCAGGTTCTTATACCTTAAGTTTTGGTGTGGGTACATCGGGTAGTGAGGCATGGCAGGCTACTCCTGAATGGGTAGCTACTGAGATGGAGAATAGGATTAAAGAGGATACTACTCTTAATGCGCGTTATACTGTTGTACGGGAAGGTAGTACGGTTGCACTTAAAGCTAAATCTGCTATAGATACAAACTTGCTAGTGATTGAGTCTGGTACAGGTAGTACTTATATTCAGACGAGTAATTCTAGTCGTGTACAAGGTAAACAGGATATTATTGCTAATCTACCTAATATCTTAGATAAGTATATTATTGCGGTAGGTACAGTAGGTAACTCCGCTTATTACCAATACAACGCTACTACAAGTACTTGGAAAGAATGTGGTGTATATGAGGCTCCATATAAGTTCACTAACGAACCTATTTACTGGTACTTTGATGATACTGATACTATCCAAGTTAAAAGCCTAGATATTCAACCACGTACAGCAGGTGATGATGATAATAACCCACTACCTAAGTTTGTGGATTTTGGTATCACAGGTATTAGTGCTTATCAATCACGTTTAGTACTACTTAGTGGTTCATATGTTAATATGAGTGCTACAGCAGACTTTAATGTCTATATGCGTACTACTGTAGAGGAATTACAGGATGATGACCCTATTGAAGTGTCTAGTACTGCTTTGAGTGCTGCACAGTTTGAATATGCTGTTCCGTACAATAAAGATTTAGTTTTATTGGCGCAGAATCAACAAGCTGTTATCCCAGCTAACAGTACAGTACTTACACCTAAGACGGCTGTTATCTATCCAAGTTCAAAAGCTAACATTAGTATGGCTAGTGAACCGCAGGTCGTATCACGTAGTTTGTATTATACATATCAACGTGGTACAGATTACTATCAAGTTGGTGAGATGATCCCTAATGCTTACTCAGATGCACAGTACTATGCCCAGAACTTAGCAGACCATATCCCGTTATATGCTACAGGTGTTTGTACTTCAATCACAGGTAGTACTACTGATAATATGGCAGTGTTCAGTTCAGACCAGAAAGAGTTACTTGTACACCAGTACTTATGGGCAGGTGAAGATCGTCCGTTAATGAGCTTCCATAAATGGGAGTTACCTTATGATGTACTTCATGTACAATTCTTGCAAGAGTATTTAGTACTGTTTATGGATGTAGGTGATGATTTAGTAGTTGGTACTATTAACGTACAGTTAAACCAGCTAGACAATAAACCTATCCCATTCTTAGACATTTACCAATACGTAGATATTGTAGACGGGGAAGGTACATTACCTGAGTTCTTACCAGCAGGTGAATTAGTAGCTGCGGTATATAGTTCTGAAACTATGCGTCATGCTAAGGTTCAATATGAAATTGAAGGTACTAAGATTAAATGTCAATTCAATGGACGTATTTATCTAGGTGTACCTTATGAAAGTTCACTCACACTAACACCGCCTTTTGTTAAAGACGATAAAGGTCGAGTAGTTGCTGGAAGTAATAGTACAGTAATTGATCTTACTATGACCTTCAAAAGTACAGGTGAGTTTGAGTACCATGTTTCTGATACCTATGGTGACGTGTTTGATGGTGAAACATCTGCACAAGCTTGGTCAGAAACACAACTAGGGTATACGCGAGTAAATACAGTTAGTGATGTTAAGTTCCCATGTGGTACGTTATTGAGTTCAACGGAGTTCAGTATCCGTACTAAAGGTACAACTGAGTTAAACATCATTAGTGCTAGTTATAATATCCGTGTACCAAACAGAGGACGGAGACGTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
050479cb72c12b1e63e4ad19ec363f974f7f4022729802e9ebd682c30ebdc515
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8686
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of bacteriophage phiAB1, a phiKMV-like virus infecting multidrug-resistant Acinetobacter baumannii Chang,K.C., Lin,N.T., Hu,A., Lin,Y.S., Chen,L.K. and Lai,M.J. 2011 21241792 GenBank