Protein

Genbank accession
ACJ68914.1 [GenBank]
Protein name
minor capsid protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSLQNLTLVTNKKLTNLQDAVIRQSEKGLTITAIFINEDNSPYDLTNKKVTFNEHKDSDKYVVDTNVQIIDARNGSISYTLHSQCYAATGEAWFEIADASGTVVDSTQNFNLKVKDAANASIYNTNYITQLDQLRSQMQTLVDNADGQLKQQLKTTQDQMNQKLTELGNAYQLAEQGRANAYKQAEANRDNGWSQDKKRIDTEWNQDKDRINGEWNTQKKSIQSTANNQQSSIQSTADSNFKAIGNEWSQIRNTAKSELATIQTNINSLQAVIDNLNKNKIPNLNQLVSAIQDKVTQLQNNLHDINWASFVKSVNGVTPDASGNVQVDTYTKAVIDNKVANAAKVKTVQGQQPDASGNVTLPKQTVVKTYDYNNNTEPSDKKTYSYGDAWLVDSAIIKGLISWLPTKYATKNIVNLSTPMFYSTKNIDDFTAMGSPNKAQTLTVYRSDFSGNDDGKPGLANYSQGLIFGAWNGRGVLSISNNTKERKARISGGTYDDSNYPIWSEDIAWKSDLTNYYNKSQIDNKTNNLKEESDSNKAEVLSLRMRCDNLETRCKTLESRCSSLETQLAVLQGQMANLLSKISVGSKEVVIKANLLVKEGNIQNYWGGTDQYVSYSPFGKRRGQFGIYDDGSFHTGR
Physico‐chemical
properties
protein length:637 AA
molecular weight: 70996,76840 Da
isoelectric point:7,51976
aromaticity:0,07849
hydropathy:-0,71680

Domains

Domains [InterPro]
G3DSA:2.60.40.3350
1–120
G3DSA:2.60.40.3350 Coil Coil Coil G3DSA:1.20.5.340
IPR018913
4–139
IPR018913 Coil
ACJ68914.1
1 637
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage Lv-1
[NCBI] 		578234 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus jensenii
[NCBI] 		109790 Bacteria > Firmicutes > Bacilli > Lactobacillales > Lactobacillaceae > Lactobacillus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACJ68914.1 [NCBI]
Genbank nucleotide accession
EU871039 [NCBI]
CDS location
range 17024 -> 18937
strand +
CDS
ATGAGTCTACAAAATCTAACACTGGTCACAAACAAAAAGTTAACTAACTTGCAAGATGCAGTAATCAGGCAGTCTGAAAAAGGCTTAACGATTACTGCTATTTTTATAAATGAAGATAATAGTCCTTATGACTTAACTAACAAAAAAGTTACTTTTAACGAACATAAAGACTCAGATAAGTACGTAGTTGATACCAACGTTCAAATAATAGATGCCAGAAATGGATCTATTAGTTACACACTTCATAGTCAGTGCTATGCAGCGACAGGAGAAGCATGGTTTGAAATTGCGGACGCTTCAGGAACAGTAGTTGACTCAACACAAAACTTCAATTTGAAAGTAAAAGATGCAGCTAATGCCTCAATCTATAACACTAACTACATCACTCAATTGGATCAGTTGCGTAGTCAAATGCAAACTCTTGTAGATAATGCAGACGGTCAACTTAAACAACAGTTGAAAACCACACAAGACCAAATGAACCAGAAGCTTACTGAATTAGGCAATGCCTATCAACTAGCCGAACAAGGTCGTGCTAATGCTTATAAACAAGCTGAAGCAAATCGTGATAATGGTTGGAGCCAAGATAAGAAAAGAATTGATACAGAGTGGAATCAAGATAAAGACCGTATTAACGGAGAATGGAATACTCAAAAGAAATCAATTCAAAGCACTGCTAATAATCAGCAAAGTTCAATTCAATCTACTGCTGATAGTAATTTTAAAGCTATCGGAAATGAATGGAGTCAGATTAGAAATACTGCTAAATCAGAGTTAGCAACTATTCAAACAAATATTAATAGCTTACAAGCTGTAATTGATAATTTGAATAAGAACAAGATTCCAAATCTAAACCAATTGGTATCAGCTATTCAAGATAAGGTAACTCAACTTCAAAATAATTTGCATGATATTAATTGGGCTTCTTTTGTTAAATCAGTAAATGGCGTAACTCCAGATGCTAGTGGCAACGTACAAGTTGATACTTATACTAAGGCAGTTATTGATAATAAAGTGGCAAATGCAGCTAAGGTGAAGACCGTTCAAGGTCAACAGCCTGATGCTTCAGGGAATGTTACTTTGCCTAAGCAAACAGTTGTTAAAACTTATGACTATAACAATAATACTGAACCCTCTGATAAAAAGACCTATAGTTATGGGGATGCTTGGCTAGTAGATAGTGCTATTATTAAGGGTTTAATTAGTTGGTTACCAACTAAATATGCTACCAAAAATATTGTTAATTTAAGTACTCCAATGTTTTATTCAACGAAAAATATTGATGATTTTACAGCGATGGGAAGTCCTAATAAAGCACAAACATTAACAGTTTATCGTTCTGATTTTAGTGGTAATGATGATGGAAAACCTGGGTTAGCCAATTATTCACAAGGCTTAATTTTTGGTGCTTGGAATGGTCGAGGCGTGCTATCGATTTCAAATAACACAAAAGAGCGAAAAGCAAGAATTTCAGGCGGAACATATGATGATAGCAATTATCCTATCTGGTCCGAAGATATTGCGTGGAAAAGTGATTTAACTAATTACTACAACAAGTCTCAAATTGACAATAAAACCAATAATTTAAAAGAAGAAAGTGACTCTAACAAGGCTGAAGTACTCAGCTTAAGGATGAGGTGTGACAATCTTGAAACACGTTGTAAGACTTTAGAAAGCAGATGTTCAAGCCTTGAAACACAGCTTGCAGTTTTACAAGGCCAAATGGCTAACTTACTATCTAAAATTTCTGTGGGTAGTAAAGAAGTTGTCATTAAAGCTAACTTACTTGTTAAAGAAGGTAACATTCAAAATTATTGGGGCGGTACTGACCAATATGTATCGTACTCTCCATTTGGAAAACGTCGTGGTCAGTTTGGTATATACGATGATGGTAGTTTCCATACTGGTAGATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
8cc2ee45390424c51d807b6ad19fd8afc5c1dfd10bab70b8e96d04bfa95e2546
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6553
Evidence 0,6553
Download PDB

Literature

Title Authors Date PMID Source
Prophage induction versus vaginal homeostasis: analysis of the lysogenic status of vaginal lactobacilli and characterization of a defective bacteriophage Martin,R., Soberon,N.E. and Suarez,J.E. 1902-07 — GenBank