Protein

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Genbank accession
ACJ68914.1 [GenBank]
Protein name
minor capsid protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSLQNLTLVTNKKLTNLQDAVIRQSEKGLTITAIFINEDNSPYDLTNKKVTFNEHKDSDKYVVDTNVQIIDARNGSISYTLHSQCYAATGEAWFEIADASGTVVDSTQNFNLKVKDAANASIYNTNYITQLDQLRSQMQTLVDNADGQLKQQLKTTQDQMNQKLTELGNAYQLAEQGRANAYKQAEANRDNGWSQDKKRIDTEWNQDKDRINGEWNTQKKSIQSTANNQQSSIQSTADSNFKAIGNEWSQIRNTAKSELATIQTNINSLQAVIDNLNKNKIPNLNQLVSAIQDKVTQLQNNLHDINWASFVKSVNGVTPDASGNVQVDTYTKAVIDNKVANAAKVKTVQGQQPDASGNVTLPKQTVVKTYDYNNNTEPSDKKTYSYGDAWLVDSAIIKGLISWLPTKYATKNIVNLSTPMFYSTKNIDDFTAMGSPNKAQTLTVYRSDFSGNDDGKPGLANYSQGLIFGAWNGRGVLSISNNTKERKARISGGTYDDSNYPIWSEDIAWKSDLTNYYNKSQIDNKTNNLKEESDSNKAEVLSLRMRCDNLETRCKTLESRCSSLETQLAVLQGQMANLLSKISVGSKEVVIKANLLVKEGNIQNYWGGTDQYVSYSPFGKRRGQFGIYDDGSFHTGR
Physico‐chemical
properties
protein length:637 AA
molecular weight: 70996,76840 Da
isoelectric point:7,51976
aromaticity:0,07849
hydropathy:-0,71680

Domains

Domains [InterPro]
G3DSA:2.60.40.3350
ATT
1–120
G3DSA:2.60.40.3350 Coil Coil Coil G3DSA:1.20.5.340
DC_1249
STR
3–460
DC_1249 Coil
IPR018913
ATT
4–139
IPR018913
ACJ68914.1
1 637
Architecture
ATT
STR
STR
ATT 1-139 | STR 140-460 | STR 508-594 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage Lv-1
[NCBI] 		578234 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus jensenii
[NCBI] 		109790 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACJ68914.1 [NCBI]
Genbank nucleotide accession
EU871039 [NCBI]
CDS location
range 17024 -> 18937
strand +
CDS
ATGAGTCTACAAAATCTAACACTGGTCACAAACAAAAAGTTAACTAACTTGCAAGATGCAGTAATCAGGCAGTCTGAAAAAGGCTTAACGATTACTGCTATTTTTATAAATGAAGATAATAGTCCTTATGACTTAACTAACAAAAAAGTTACTTTTAACGAACATAAAGACTCAGATAAGTACGTAGTTGATACCAACGTTCAAATAATAGATGCCAGAAATGGATCTATTAGTTACACACTTCATAGTCAGTGCTATGCAGCGACAGGAGAAGCATGGTTTGAAATTGCGGACGCTTCAGGAACAGTAGTTGACTCAACACAAAACTTCAATTTGAAAGTAAAAGATGCAGCTAATGCCTCAATCTATAACACTAACTACATCACTCAATTGGATCAGTTGCGTAGTCAAATGCAAACTCTTGTAGATAATGCAGACGGTCAACTTAAACAACAGTTGAAAACCACACAAGACCAAATGAACCAGAAGCTTACTGAATTAGGCAATGCCTATCAACTAGCCGAACAAGGTCGTGCTAATGCTTATAAACAAGCTGAAGCAAATCGTGATAATGGTTGGAGCCAAGATAAGAAAAGAATTGATACAGAGTGGAATCAAGATAAAGACCGTATTAACGGAGAATGGAATACTCAAAAGAAATCAATTCAAAGCACTGCTAATAATCAGCAAAGTTCAATTCAATCTACTGCTGATAGTAATTTTAAAGCTATCGGAAATGAATGGAGTCAGATTAGAAATACTGCTAAATCAGAGTTAGCAACTATTCAAACAAATATTAATAGCTTACAAGCTGTAATTGATAATTTGAATAAGAACAAGATTCCAAATCTAAACCAATTGGTATCAGCTATTCAAGATAAGGTAACTCAACTTCAAAATAATTTGCATGATATTAATTGGGCTTCTTTTGTTAAATCAGTAAATGGCGTAACTCCAGATGCTAGTGGCAACGTACAAGTTGATACTTATACTAAGGCAGTTATTGATAATAAAGTGGCAAATGCAGCTAAGGTGAAGACCGTTCAAGGTCAACAGCCTGATGCTTCAGGGAATGTTACTTTGCCTAAGCAAACAGTTGTTAAAACTTATGACTATAACAATAATACTGAACCCTCTGATAAAAAGACCTATAGTTATGGGGATGCTTGGCTAGTAGATAGTGCTATTATTAAGGGTTTAATTAGTTGGTTACCAACTAAATATGCTACCAAAAATATTGTTAATTTAAGTACTCCAATGTTTTATTCAACGAAAAATATTGATGATTTTACAGCGATGGGAAGTCCTAATAAAGCACAAACATTAACAGTTTATCGTTCTGATTTTAGTGGTAATGATGATGGAAAACCTGGGTTAGCCAATTATTCACAAGGCTTAATTTTTGGTGCTTGGAATGGTCGAGGCGTGCTATCGATTTCAAATAACACAAAAGAGCGAAAAGCAAGAATTTCAGGCGGAACATATGATGATAGCAATTATCCTATCTGGTCCGAAGATATTGCGTGGAAAAGTGATTTAACTAATTACTACAACAAGTCTCAAATTGACAATAAAACCAATAATTTAAAAGAAGAAAGTGACTCTAACAAGGCTGAAGTACTCAGCTTAAGGATGAGGTGTGACAATCTTGAAACACGTTGTAAGACTTTAGAAAGCAGATGTTCAAGCCTTGAAACACAGCTTGCAGTTTTACAAGGCCAAATGGCTAACTTACTATCTAAAATTTCTGTGGGTAGTAAAGAAGTTGTCATTAAAGCTAACTTACTTGTTAAAGAAGGTAACATTCAAAATTATTGGGGCGGTACTGACCAATATGTATCGTACTCTCCATTTGGAAAACGTCGTGGTCAGTTTGGTATATACGATGATGGTAGTTTCCATACTGGTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8cc2ee45390424c51d807b6ad19fd8afc5c1dfd10bab70b8e96d04bfa95e2546
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6553
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophage induction versus vaginal homeostasis: analysis of the lysogenic status of vaginal lactobacilli and characterization of a defective bacteriophage Martin,R., Soberon,N.E. and Suarez,J.E. 1902-07 — GenBank