Protein

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Genbank accession
QMP19178.1 [GenBank]
Protein name
tail spike protein with colonic acid degradation activity
RBP type
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MQGAALPLTGQEILELEQGGNSRQVRVMDLLPGFDDTLASDLASSGGAGLVGFLASEPYADGTIGGELNKIIDRLGDDFETFEDWGMVGDYVDQNNRGTDNQAAYRAMLTSGKTQFRASPGKKYYLGVLPAYGVQVSHGKPMVIDYNGAELIFDIAAPASGVVHRFYDTPCVALNFVIRNLKPVDVDPNRGLVAFNFFAKEKHTSGYVVVGKAYNCQSLVTIQSDPTTNPNHSWRISDVKVDVVTYDCYYGINCANNGDQLRGRCVSSGHRRAYFVYGVSNHDVLIFSLNQYVSTNDFIVTNYGVGPATTNINARLIKANWYAPALIGFTADEGVNSSAMVIRGVRVSALLFAGTKQDPTAFEIKHQIAGPGTIVPVSQGTLDGVEIEVNQDWMDLVPGRGKLLSVPTNFARIPRVKVNGGYVQQFGTQGIAIVTGEKFTVSNVSLGQTVTMTTRTMLGHMLGPCDFFAKFYLVGSVTVSGASAMFVDEFTVALSVNASGQLSIKNQTVTRTANSGASAVTTSLAAIAPATLRFTIAGNDAGAAATNIAAVCEILARQ
Physico‐chemical
properties
protein length:558 AA
molecular weight: 59580,69460 Da
isoelectric point:5,79999
aromaticity:0,08961
hydropathy:0,03584

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QMP19178.1
1 558
Domain Start End Length (AA) Confidence
N-terminal 1 90 90 0,9873
Central domain 91 440 351 0,9696
C-terminal 441 558 117 0,9874
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-90
Central
91-440
C-terminal
441-558

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Persinger
[NCBI] 		2749430 Uroviricota > Caudoviricetes > Harrisonburgvirus >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMP19178.1 [NCBI]
Genbank nucleotide accession
MT613935.1 [NCBI]
CDS location
range 33828 -> 35504
strand -
CDS
TTGCAGGGCGCCGCCCTGCCGCTGACTGGTCAGGAAATCCTGGAGCTGGAGCAGGGCGGAAACAGCCGCCAGGTGCGCGTCATGGACCTGCTGCCTGGTTTCGACGACACGCTGGCATCCGACCTGGCGAGTTCGGGCGGGGCCGGCCTGGTAGGCTTCCTGGCTTCGGAGCCATACGCAGACGGCACCATTGGCGGCGAGCTGAACAAGATCATTGATCGCCTGGGCGACGACTTCGAAACCTTCGAAGACTGGGGAATGGTCGGCGACTACGTGGACCAGAACAACCGTGGCACCGACAACCAGGCAGCATATCGGGCCATGCTGACTTCCGGTAAAACGCAGTTCCGAGCAAGCCCCGGCAAGAAATACTACCTGGGCGTATTGCCGGCCTACGGCGTGCAGGTGAGCCATGGCAAGCCGATGGTCATCGACTACAACGGCGCAGAACTGATTTTCGACATTGCCGCGCCTGCGTCTGGCGTCGTCCATCGGTTCTACGACACGCCGTGCGTCGCCCTGAATTTCGTTATCAGGAACCTGAAGCCGGTCGATGTAGACCCGAACCGTGGGCTGGTAGCGTTCAACTTCTTTGCGAAGGAAAAGCACACGTCCGGCTATGTCGTGGTAGGCAAGGCGTATAACTGCCAGTCGCTGGTGACCATTCAGTCCGATCCGACCACCAATCCGAACCATTCGTGGCGCATTTCCGACGTAAAAGTGGATGTCGTCACCTACGATTGCTATTACGGCATCAACTGCGCAAACAACGGCGACCAGCTGCGTGGCCGCTGCGTGTCGAGTGGCCACCGCCGAGCGTATTTCGTCTATGGCGTGTCGAACCATGACGTGCTGATTTTCAGCCTGAACCAGTACGTCAGCACAAATGATTTCATCGTCACCAATTACGGCGTCGGGCCGGCTACCACGAACATCAATGCTCGCCTGATTAAAGCGAACTGGTATGCGCCCGCGCTGATCGGTTTCACCGCAGACGAAGGCGTGAATAGTTCGGCCATGGTCATTCGCGGGGTTCGTGTCAGCGCGCTGCTTTTCGCTGGCACCAAGCAAGACCCTACCGCCTTCGAGATCAAGCACCAGATTGCTGGACCAGGCACCATAGTTCCGGTTTCGCAAGGCACGCTGGATGGCGTGGAAATCGAGGTGAACCAGGACTGGATGGACCTTGTGCCTGGTCGCGGAAAACTGCTGTCTGTCCCGACGAACTTTGCTCGCATTCCGCGTGTCAAGGTGAACGGCGGATATGTGCAGCAGTTCGGCACGCAGGGAATCGCAATCGTAACCGGCGAAAAGTTCACTGTTTCTAACGTGTCCCTTGGACAGACTGTTACGATGACCACGCGAACCATGCTGGGTCATATGCTCGGACCTTGCGACTTTTTCGCCAAGTTCTACCTGGTGGGTTCTGTCACCGTGAGCGGCGCCAGCGCCATGTTCGTGGACGAATTCACCGTGGCGCTGTCGGTTAACGCCTCTGGTCAGCTTTCGATCAAGAACCAGACCGTTACCAGGACGGCGAACAGCGGGGCGTCTGCAGTAACGACCAGCCTTGCTGCGATTGCGCCTGCAACTCTTCGCTTCACCATTGCAGGCAACGACGCGGGGGCGGCAGCGACCAACATTGCTGCGGTCTGCGAAATCCTGGCACGGCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e87a88b0bc76d2696f00107d8b05e1a50189ae4be4a6031131b56fce1d51bdde
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6959
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50