Protein

View in Explore
Genbank accession
QYW04238.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MIEVNCFADLRTTAPAKAGDMALLKRYYDKDSSFRGGGYFIGFPQTKDLPADDGGITAVDANKSFFWKRVVNDPEEINLFHFGGRCDGKTDDSDAFLRNFMWTCKSSDGNDTIGVRFPTGTTLINPIDLTHLGEIPVFAIYGDTRSDKGWRPRVKLISNQGEATVFKFNARRTIVRGLNWNGQCYPVKDGKKVDVSTIVGAVMPEQRSNNQIFLENICTMGQYIGIQCFRAESNGGSALKFQDTIDTSITEIYGSKSYGAVIEAKWSNTVQAGWNHSTAVRLENGNFQYGYGPAVLDMPRMTQAFMKNVWIEHTRFPGNMNDGQWVLEGNSIESSDNPLNLANTRCVINGYYFQGVGTMNLERASSPDNWLSGYERGNIRTETYGIIMTDSCFRAGYYTGYKITNNTDQDKWFYLGSYSFPKVNQVWRIELLGTAPNVVPNTKLQQPTQMDGMGRRVITMQRCISPQKKVYADMHMEGTDAIADVVYQRLWEDYGKVWVKLKANSGDTIFNLTTTGPTRFEAGVCTLFSDGPIECVDPVLTEMTTSVEKNQKDYARPQARFSLHNGLAGVGANEQGLITIQTKDATAPKDTTKPAGYVSVNINGVDRLLPYY
Physico‐chemical
properties
protein length:612 AA
molecular weight: 68320,19060 Da
isoelectric point:6,37031
aromaticity:0,10948
hydropathy:-0,42810

Domains

Domains [InterPro]
DC_0717
ATT
1–100
DC_0717 DC_0716
IPR012334
STR
77–437
IPR012334
QYW04238.1
1 612
Architecture
ATT
STR
ATT 1-100 | STR 101-612
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYW04238.1
1 612
Domain Start End Length (AA) Confidence
N-terminal 1 92 92 0,9802
Central domain 93 418 327 0,9667
C-terminal 419 612 193 0,8951
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-92
Central
93-418
C-terminal
419-612

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_46
[NCBI] 		2866694 No lineage information
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW04238.1 [NCBI]
Genbank nucleotide accession
MZ475894 [NCBI]
CDS location
range 208192 -> 210030
strand +
CDS
ATGATTGAAGTAAACTGTTTCGCAGATTTACGCACTACCGCTCCAGCAAAGGCTGGCGACATGGCGTTACTGAAACGTTACTATGACAAAGACAGTTCGTTTCGTGGGGGCGGCTACTTCATCGGCTTTCCGCAGACAAAAGATCTGCCCGCAGATGATGGTGGCATCACGGCAGTAGATGCAAACAAAAGTTTCTTCTGGAAGCGTGTTGTGAATGACCCAGAAGAGATTAACCTGTTCCACTTTGGTGGTCGCTGCGACGGTAAGACAGATGACAGTGACGCGTTCCTGCGTAACTTCATGTGGACGTGCAAGTCTTCTGATGGCAACGACACTATCGGTGTGCGCTTCCCAACAGGCACAACGTTGATCAACCCTATCGATCTTACTCACTTGGGTGAGATACCTGTGTTCGCTATCTATGGTGACACACGTTCTGATAAGGGCTGGCGTCCTCGTGTCAAGCTGATCAGTAACCAAGGCGAAGCTACTGTATTCAAGTTCAATGCACGCCGCACTATTGTTCGTGGCCTGAACTGGAACGGTCAGTGCTATCCTGTGAAGGACGGCAAGAAGGTAGACGTGTCCACGATCGTGGGTGCTGTCATGCCTGAGCAGCGTTCGAACAATCAGATCTTCCTTGAGAACATCTGTACGATGGGTCAGTACATTGGCATACAGTGCTTCCGTGCTGAGAGCAACGGCGGATCTGCATTGAAGTTCCAAGACACCATCGATACTTCTATCACAGAGATCTACGGCAGCAAGAGCTATGGTGCTGTGATTGAAGCCAAGTGGTCGAACACAGTGCAGGCCGGTTGGAACCACTCGACTGCTGTGCGCTTAGAGAACGGTAACTTCCAGTACGGCTACGGCCCTGCTGTGTTAGACATGCCGCGTATGACTCAGGCGTTCATGAAGAACGTCTGGATTGAGCACACGCGATTCCCAGGTAATATGAACGATGGTCAATGGGTGCTTGAAGGTAACTCGATTGAGAGTTCTGACAACCCACTCAATCTGGCTAACACTCGTTGTGTGATCAACGGCTACTACTTCCAAGGCGTTGGTACAATGAACTTGGAACGTGCGTCAAGCCCTGACAACTGGCTGAGTGGCTACGAGCGCGGCAACATTCGTACTGAGACGTACGGTATCATCATGACCGATTCCTGCTTCCGCGCAGGATACTACACGGGCTATAAGATTACCAACAATACAGATCAGGACAAATGGTTCTATCTGGGCAGCTACTCATTCCCGAAAGTGAATCAAGTGTGGCGGATTGAACTGCTGGGTACTGCACCAAACGTTGTGCCTAACACGAAGCTGCAACAGCCTACGCAGATGGACGGCATGGGTCGTCGTGTTATCACAATGCAACGCTGCATCTCACCGCAGAAGAAAGTGTATGCCGATATGCACATGGAAGGAACGGACGCAATCGCCGATGTTGTGTACCAGCGCCTGTGGGAAGACTACGGCAAGGTGTGGGTTAAGCTGAAAGCCAACAGTGGCGATACTATCTTCAACCTGACCACCACTGGTCCAACTCGTTTCGAAGCAGGTGTTTGTACATTGTTCAGCGACGGTCCAATTGAATGCGTGGATCCCGTTCTGACCGAGATGACAACCAGTGTCGAAAAGAATCAGAAGGACTATGCGCGACCTCAGGCTCGTTTCAGTTTGCACAATGGCCTTGCAGGTGTAGGCGCAAACGAGCAGGGTCTCATCACTATTCAAACCAAAGACGCTACAGCACCGAAAGATACCACTAAGCCTGCTGGCTATGTGAGTGTCAATATCAACGGTGTTGATCGTCTCTTGCCTTACTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e3e5af842ae5d2d6eec15e0e0b37275bd767dbd58eb2689166c071e6baff9e62
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6665
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_46 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank