Protein

Genbank accession
AUR89088.1 [GenBank]
Protein name
pectin lyase fold/virulence factor
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MAKIPQLQSTTTLGLEDETIVRQGTVDKRVRLQLAATLAWARRNGFNHLGAHSSGVTFTSHIDFTTFGGRAYFLNKSTAVDHVSNVTDPRTDDELYHRVDVATHDLEDRIAYKWGLSSNGDSTSVANEVYLYQPTDAQGDKTGATIEVYDPVGGNEMGVNPDYSVFNPVSGFIDVTPLFSDNTQNIQAAVDAAESSYTTRGIAIPVRLKAGSYNLVTPSTKGMTWPVKLSGGTTGTISSDKCYIVLPDNVTVIFDDGAVLLPNSDSVSAVFVSNGNNTRIEKFHCVGTSPSTGNCHGIFQLATDLDNEIFNLRIIRPIIRNVSSYGIGLQYGKHRSCVIDSPYIRDTGADCIDIKSRRETGDLYNDTDISCAVISPDLVGAGNRLVGSVGLDIRGSWNVSNVSVILNQNDTSGVRLRPADETLPDARNVAFMANVVNVAVEAISPSLTGTIGLVSQGVNCNISNVSSDACEIGVASQGSGSGEDTSFTNFSNINVTRHKIAGWDSTPTSKNTTVTNFSASNATSLTANHINVEGTGNTFIGLTYDDSVTVAKNIAGVARDSTVIMGEVATSESPQVSLEAVTPSLTQVRAVGGGTDVDMAITPKGTGKIRYGTYQAGSVTATGYIEIKDASGAIRKLIVA
Physico‐chemical
properties
protein length:640 AA
molecular weight: 67816,55490 Da
isoelectric point:5,05318
aromaticity:0,06406
hydropathy:-0,13562

Domains

Domains [InterPro]
IPR011050
180–563
IPR011050
AUR89088.1
1 640
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.121.O._10N.286.46.C4
[NCBI] 		2070726 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR89088.1 [NCBI]
Genbank nucleotide accession
MG592495 [NCBI]
CDS location
range 45197 -> 47119
strand +
CDS
ATGGCTAAAATACCGCAGTTACAATCCACCACTACCCTAGGTTTAGAGGATGAAACTATTGTACGTCAAGGTACGGTAGATAAGCGAGTTCGATTACAATTGGCAGCCACACTAGCTTGGGCGCGTCGTAATGGGTTCAATCACCTAGGTGCGCATAGCTCGGGGGTGACTTTCACATCTCATATCGACTTTACTACTTTCGGAGGTCGAGCTTACTTCCTTAATAAAAGTACTGCCGTTGATCATGTAAGTAATGTAACAGATCCTCGCACTGATGATGAGCTTTACCATCGGGTAGATGTGGCAACTCATGATTTAGAGGATCGTATCGCCTACAAGTGGGGGTTGAGTTCTAATGGTGACAGTACATCCGTGGCTAATGAGGTTTACCTGTACCAGCCGACTGATGCGCAGGGAGACAAAACGGGGGCCACAATCGAAGTCTACGACCCTGTAGGCGGGAATGAGATGGGGGTCAATCCTGATTATTCAGTATTTAACCCCGTCTCAGGGTTCATAGACGTAACCCCCCTATTTTCTGACAACACACAAAACATACAGGCGGCAGTTGATGCAGCAGAGAGTTCGTATACCACGCGGGGGATCGCGATTCCTGTTCGCCTTAAGGCGGGAAGCTACAACCTTGTAACACCAAGTACAAAAGGGATGACTTGGCCTGTTAAGCTTTCTGGTGGAACTACAGGTACCATAAGTAGTGATAAGTGTTACATTGTCCTCCCTGATAACGTTACTGTCATTTTTGATGATGGCGCGGTTCTTTTGCCTAACTCTGACAGCGTTTCTGCCGTATTTGTTTCGAACGGAAACAACACACGAATAGAAAAGTTTCACTGCGTTGGCACATCTCCGAGCACAGGAAACTGCCACGGAATATTTCAACTAGCAACAGACCTTGACAATGAGATTTTCAATCTAAGGATTATTAGGCCCATTATCCGCAACGTTTCCAGTTACGGGATAGGATTGCAGTACGGAAAGCATAGATCTTGTGTAATAGACTCACCATACATCAGAGATACCGGAGCAGACTGTATAGACATAAAATCACGAAGAGAAACGGGCGATCTTTATAATGACACCGATATATCTTGCGCCGTCATATCCCCTGATTTAGTTGGCGCAGGAAATAGACTTGTTGGATCTGTTGGCTTAGATATTCGTGGGTCATGGAACGTCAGTAATGTCTCTGTGATATTGAATCAAAATGATACATCAGGGGTACGATTGAGGCCAGCGGACGAAACACTGCCCGACGCAAGAAACGTTGCGTTCATGGCTAATGTTGTAAATGTGGCAGTTGAAGCCATAAGCCCATCATTGACGGGAACAATTGGCCTTGTGTCTCAAGGCGTTAACTGTAACATATCAAACGTTTCTAGTGATGCCTGTGAAATTGGCGTTGCCTCTCAGGGTTCTGGATCGGGGGAGGACACCTCTTTCACAAATTTTTCAAATATAAACGTGACCCGACACAAGATTGCCGGATGGGATAGCACTCCAACTAGCAAAAACACGACAGTGACGAACTTCAGCGCCAGCAATGCAACGTCTTTAACTGCAAACCACATCAACGTTGAGGGGACGGGCAATACGTTTATTGGCCTAACCTATGACGACTCGGTGACTGTAGCTAAAAATATAGCGGGGGTTGCAAGAGACTCAACAGTGATCATGGGAGAGGTGGCGACAAGCGAGTCGCCGCAGGTATCCCTTGAGGCTGTTACACCCTCCCTCACTCAGGTCAGGGCGGTAGGCGGCGGGACTGACGTAGACATGGCTATTACCCCCAAAGGTACTGGAAAGATTCGTTACGGAACATACCAAGCGGGGTCGGTAACGGCGACCGGATATATTGAGATAAAAGACGCATCGGGGGCGATCAGAAAGCTGATAGTCGCATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
914b06ee6a920b87c7b504c87c6f0f107a5c3a961a9079ef8a1f21b6ad8a8906
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6915
Evidence 0,6915
Download PDB

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank