Protein

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Genbank accession
AUR89088.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAKIPQLQSTTTLGLEDETIVRQGTVDKRVRLQLAATLAWARRNGFNHLGAHSSGVTFTSHIDFTTFGGRAYFLNKSTAVDHVSNVTDPRTDDELYHRVDVATHDLEDRIAYKWGLSSNGDSTSVANEVYLYQPTDAQGDKTGATIEVYDPVGGNEMGVNPDYSVFNPVSGFIDVTPLFSDNTQNIQAAVDAAESSYTTRGIAIPVRLKAGSYNLVTPSTKGMTWPVKLSGGTTGTISSDKCYIVLPDNVTVIFDDGAVLLPNSDSVSAVFVSNGNNTRIEKFHCVGTSPSTGNCHGIFQLATDLDNEIFNLRIIRPIIRNVSSYGIGLQYGKHRSCVIDSPYIRDTGADCIDIKSRRETGDLYNDTDISCAVISPDLVGAGNRLVGSVGLDIRGSWNVSNVSVILNQNDTSGVRLRPADETLPDARNVAFMANVVNVAVEAISPSLTGTIGLVSQGVNCNISNVSSDACEIGVASQGSGSGEDTSFTNFSNINVTRHKIAGWDSTPTSKNTTVTNFSASNATSLTANHINVEGTGNTFIGLTYDDSVTVAKNIAGVARDSTVIMGEVATSESPQVSLEAVTPSLTQVRAVGGGTDVDMAITPKGTGKIRYGTYQAGSVTATGYIEIKDASGAIRKLIVA
Physico‐chemical
properties
protein length:640 AA
molecular weight: 67816,55490 Da
isoelectric point:5,05318
aromaticity:0,06406
hydropathy:-0,13562

Domains

Domains [InterPro]
DC_1839
STR
170–640
DC_1839
IPR011050
STR
180–563
IPR011050
AUR89088.1
1 640
Architecture
STR
STR 170-640
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR89088.1
1 640
Domain Start End Length (AA) Confidence
N-terminal 1 182 182 0,9885
Central domain 183 565 384 0,9747
C-terminal 566 640 74 0,9214
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-182
Central
183-565
C-terminal
566-640

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.121.O._10N.286.46.C4
[NCBI] 		2070726 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterovibrio norvegicus
[NCBI] 		188144 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR89088.1 [NCBI]
Genbank nucleotide accession
MG592495.1 [NCBI]
CDS location
range 45197 -> 47119
strand +
CDS
ATGGCTAAAATACCGCAGTTACAATCCACCACTACCCTAGGTTTAGAGGATGAAACTATTGTACGTCAAGGTACGGTAGATAAGCGAGTTCGATTACAATTGGCAGCCACACTAGCTTGGGCGCGTCGTAATGGGTTCAATCACCTAGGTGCGCATAGCTCGGGGGTGACTTTCACATCTCATATCGACTTTACTACTTTCGGAGGTCGAGCTTACTTCCTTAATAAAAGTACTGCCGTTGATCATGTAAGTAATGTAACAGATCCTCGCACTGATGATGAGCTTTACCATCGGGTAGATGTGGCAACTCATGATTTAGAGGATCGTATCGCCTACAAGTGGGGGTTGAGTTCTAATGGTGACAGTACATCCGTGGCTAATGAGGTTTACCTGTACCAGCCGACTGATGCGCAGGGAGACAAAACGGGGGCCACAATCGAAGTCTACGACCCTGTAGGCGGGAATGAGATGGGGGTCAATCCTGATTATTCAGTATTTAACCCCGTCTCAGGGTTCATAGACGTAACCCCCCTATTTTCTGACAACACACAAAACATACAGGCGGCAGTTGATGCAGCAGAGAGTTCGTATACCACGCGGGGGATCGCGATTCCTGTTCGCCTTAAGGCGGGAAGCTACAACCTTGTAACACCAAGTACAAAAGGGATGACTTGGCCTGTTAAGCTTTCTGGTGGAACTACAGGTACCATAAGTAGTGATAAGTGTTACATTGTCCTCCCTGATAACGTTACTGTCATTTTTGATGATGGCGCGGTTCTTTTGCCTAACTCTGACAGCGTTTCTGCCGTATTTGTTTCGAACGGAAACAACACACGAATAGAAAAGTTTCACTGCGTTGGCACATCTCCGAGCACAGGAAACTGCCACGGAATATTTCAACTAGCAACAGACCTTGACAATGAGATTTTCAATCTAAGGATTATTAGGCCCATTATCCGCAACGTTTCCAGTTACGGGATAGGATTGCAGTACGGAAAGCATAGATCTTGTGTAATAGACTCACCATACATCAGAGATACCGGAGCAGACTGTATAGACATAAAATCACGAAGAGAAACGGGCGATCTTTATAATGACACCGATATATCTTGCGCCGTCATATCCCCTGATTTAGTTGGCGCAGGAAATAGACTTGTTGGATCTGTTGGCTTAGATATTCGTGGGTCATGGAACGTCAGTAATGTCTCTGTGATATTGAATCAAAATGATACATCAGGGGTACGATTGAGGCCAGCGGACGAAACACTGCCCGACGCAAGAAACGTTGCGTTCATGGCTAATGTTGTAAATGTGGCAGTTGAAGCCATAAGCCCATCATTGACGGGAACAATTGGCCTTGTGTCTCAAGGCGTTAACTGTAACATATCAAACGTTTCTAGTGATGCCTGTGAAATTGGCGTTGCCTCTCAGGGTTCTGGATCGGGGGAGGACACCTCTTTCACAAATTTTTCAAATATAAACGTGACCCGACACAAGATTGCCGGATGGGATAGCACTCCAACTAGCAAAAACACGACAGTGACGAACTTCAGCGCCAGCAATGCAACGTCTTTAACTGCAAACCACATCAACGTTGAGGGGACGGGCAATACGTTTATTGGCCTAACCTATGACGACTCGGTGACTGTAGCTAAAAATATAGCGGGGGTTGCAAGAGACTCAACAGTGATCATGGGAGAGGTGGCGACAAGCGAGTCGCCGCAGGTATCCCTTGAGGCTGTTACACCCTCCCTCACTCAGGTCAGGGCGGTAGGCGGCGGGACTGACGTAGACATGGCTATTACCCCCAAAGGTACTGGAAAGATTCGTTACGGAACATACCAAGCGGGGTCGGTAACGGCGACCGGATATATTGAGATAAAAGACGCATCGGGGGCGATCAGAAAGCTGATAGTCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
914b06ee6a920b87c7b504c87c6f0f107a5c3a961a9079ef8a1f21b6ad8a8906
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6915
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank