Protein

View in Explore
Genbank accession
AFC22368.1 [GenBank]
Protein name
small distal tail fiber subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MADLKLGTTLGGAGIWSASNLPLLPSGDRLTYKGWRVYTENDRPTAKDINALSTINGGTVAKNTTFNQSVTVGINLTANTLYSKSYVDITTGGAAPGILFKRSDVTGTPSTEQGIMQITGVNASGVTLATLNINARADGGNRIYLNAYKNGVSNTSFVVDSANQLVSVEQGSFRVAGSSTFAAVSATTLNVSGAITANTVTPTDWTNHDNRYITGIPRSMQGNSFGAAVVTEKNDVLSVGGNVIDGPYGNTTYSGQVSTYRRTLNSGVSLVQTYYDTNSSWIRSGSGSPGAWSWSAGDANGWRRIYDTATPPTPAEVGAVNKAGDTMSGVLTLAPISQPLKTQGGGVFAYDGNVYINKVGFSGWIDDLFFKNTGGVVTGTIDQDWLNQNVYCTSALSHTATGSKNYLRRFRGGNGDQIWHETVQGGTYRLATGDTDSANLLTIESSGNMFLNGSQGGSSNLFLDADSNSIVWYRMLNGAEKAVTFASNDGVYHIRTNNVRSNTWDFRAGMILNLGICSGTDYALIRGTPDGGGWDQWRERSSGLQIDMPNGATSAYNIWKATVWGATHVAAMDVHIPNNDGNQSRVRLIHQSNQYVYFDASGQVTVSGNGNFNDVYIRSDERLKSNLSKIESALDKVDLLEGVIYDKAEHIGGEPTTREAGLVAQQLQKVLPEAVTIGEDTKGNEILGVSSSAVVALLVNAIKELREEIRELKSR
Physico‐chemical
properties
protein length:715 AA
molecular weight: 76324,57120 Da
isoelectric point:5,73098
aromaticity:0,08252
hydropathy:-0,28643

Domains

Domains [InterPro]
DC_0643
STR
5–715
DC_0643
IPR030392
CHP
619–676
IPR030392 Coil
IPR030392
CHP
619–715
IPR030392
AFC22368.1
1 715
Architecture
STR
STR 5-715
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFC22368.1
1 715
Domain Start End Length (AA) Confidence
N-terminal 1 326 326 0,1791
Central domain 327 525 200 0,2388
C-terminal 526 715 189 0,9523
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-326
Central
327-525
C-terminal
526-715

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaM_GAP161
[NCBI] 		1141138 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus gap161
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
759c715a6c26d415d83ff613e25818b91cebac2cba5fd6d5979cfebfd22d0a50
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5845
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50