Protein

View in Explore
Genbank accession
QIW88447.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MSSTIFPHTVNESVVDYNLIPVGTLLLGFTTKNLTTKTYKNNIAIVGNSKRNLKDFIQYYSFSDGSILRYYKGQLTTVVPNIYLRDISGVNISGNATYLAVTALGNIVNTDRKEYQLKELSDVIDTVASNKYALTYNSEVWGYAPESSALSKFDDVSYAIVSYGVFVSYFAPTNVGGFDNTYRILPLTIDWDKAPRLGGNLNCNGKSINNLTYLCQNFEAQQPLSSLVIDTVKNSESNIVCTDEVKALDLQFTVNSDHLKFFTLNVINFVGLISFKADAEIIFENGYLPKITKPDNTYTLLIYRDDVKLKIIILYKNRNMTAFTN
Physico‐chemical
properties
protein length:325 AA
molecular weight: 36439,94850 Da
isoelectric point:6,16313
aromaticity:0,12000
hydropathy:-0,06400

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIW88447.1
1 325
Domain Start End Length (AA) Confidence
N-terminal 1 110 110 0,6088
Central domain 111 309 200 0,1951
C-terminal 310 325 15 0,9896
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-110
Central
111-309
C-terminal
310-325

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudanabaena phage PA-SR01
[NCBI] 		2723892 No lineage information
Host Pseudanabaena sp.
[NCBI] 		1153 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW88447.1 [NCBI]
Genbank nucleotide accession
MT234670.1 [NCBI]
CDS location
range 11035 -> 12012
strand +
CDS
ATGAGTAGCACTATATTTCCACATACAGTTAATGAGAGTGTGGTAGATTACAACCTAATTCCTGTAGGCACTTTGCTTTTAGGATTTACAACTAAAAACCTTACCACAAAAACATATAAAAACAATATCGCAATTGTAGGAAACAGTAAACGTAATCTGAAAGACTTCATCCAGTATTATTCTTTTTCTGATGGTTCTATTCTTCGTTACTACAAAGGTCAATTAACTACTGTCGTACCTAATATTTACCTGAGAGATATATCAGGTGTAAATATAAGTGGTAACGCCACTTACCTTGCAGTCACTGCATTAGGTAATATAGTAAATACAGACAGAAAAGAATATCAATTGAAAGAGCTTAGTGATGTAATTGATACAGTGGCTTCCAACAAATATGCACTGACATATAACAGCGAGGTTTGGGGATATGCACCTGAATCATCCGCACTAAGTAAATTTGATGATGTCAGCTACGCAATTGTTTCTTATGGTGTTTTCGTATCTTACTTTGCACCTACAAATGTGGGTGGTTTTGATAATACCTACCGAATTTTACCTCTCACTATCGATTGGGATAAAGCTCCAAGATTGGGGGGTAATTTAAACTGCAACGGAAAGTCAATCAACAACCTCACATACTTGTGCCAAAACTTTGAAGCTCAACAGCCCCTATCTAGTTTAGTAATAGATACAGTAAAGAACTCTGAATCTAATATAGTATGCACCGACGAAGTTAAAGCACTTGACCTACAATTTACCGTTAACAGTGACCACCTCAAGTTTTTTACACTTAACGTTATCAATTTTGTTGGCTTAATAAGTTTCAAAGCTGACGCTGAAATAATCTTTGAGAATGGATATTTACCTAAAATTACCAAACCAGACAATACCTACACTCTACTAATATATAGAGATGATGTTAAACTAAAGATAATAATTTTATACAAAAACCGCAACATGACGGCATTTACTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ad2609f23c6f17e832bd15b6d078659bd90d314630670cd04f0fa4d658a3d985
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4204
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of first freshwater cyanophage infecting Pseudanabaena Zhang,D. 2020-08-17 — GenBank