Protein

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Genbank accession
WQY99543.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGLISQSIKNLKGGISQQPDILRFPEQGAAQINGWSSETEGLQKRPPLLFNRTIDTAASVGAAPYVHLINRDEFEQYHVVFTGTSIRVFDLDGVEYPVDYENNSQAYIQTANPRDDLRMVTVADYTFVVNRKRVVQVNPNSKNDGGAFNPKQDALINVRGGQYGRTLSVSINGGTQASYKIPDGDKPTDVGNTDAQWLAEELARQLRANTPGWAFHVGQGYIWIVAPAGQEINSLVTKDGYADQLISPVTHYAQSFAKLPINAPDGYRVKIVGDTSKTADQYYVRYDATRKVWSECPAWNITTQFYLETMPHALVRKADGRFAFRWNSWNARSAGDDDTNPYPSFVDNTINDVFFFRNRLGFLSGENIILSRTAKYFNFFPPSVANLSDDDPIDVAVSHNRVSTLKYAVPFTEELLLWSDEAQFVLGASGILSSKTVELNLTTQFDVQDKSRPYGIGRNVYFASPRATYTSMSRYYAVQDVSSVKSAEDITAHVPNYIPNGVFSISGTSSENFATVLTSGAKGKVFIYKFLYLDEELRQQSWSHWDFGDNVEVLAANCIGSRMYILMRNQFNLWSCEVNFTKESIDYDIEPYRVHLDMKKAYTIPSDAFNEDTFQTSLSISAVYQSNFQRGSVTIVEADGKTTTIPAPEGGWNSSPWISLDGNLAGKTVIIGFNYEFRYEFSKFLIKKAADDGSTATEDIGRLQLRRAWLNYERSGAFTIQVQNLSRVFEYDMAGGRLGSDNLRIGRLNLGTGQYRFPVAGNASYNTVILISDNTTPLNVIGCGWEGNYIRRSSGI
Physico‐chemical
properties
protein length:796 AA
molecular weight: 88967,20330 Da
isoelectric point:5,52216
aromaticity:0,12060
hydropathy:-0,35276

Domains

Domains [InterPro]
IPR058003
TTP
1–796
IPR058003
WQY99543.1
1 796
Architecture
TTP
TTP 1-796
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WQY99543.1
1 796
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9912
Central domain 143 350 209 0,1881
C-terminal 351 796 445 0,2215
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-350
C-terminal
351-796

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage NJ2
[NCBI] 		3108955 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Yuanmingyuanvirus
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WQY99543.1 [NCBI]
Genbank nucleotide accession
OR822025 [NCBI]
CDS location
range 634 -> 3024
strand +
CDS
ATGGGACTTATTAGTCAAAGTATCAAAAACCTTAAGGGTGGTATTAGCCAGCAACCGGATATCCTGAGGTTCCCGGAGCAGGGAGCCGCTCAGATAAACGGGTGGTCCTCAGAGACCGAGGGCCTTCAGAAGCGTCCACCTTTACTGTTCAACCGGACAATCGACACAGCGGCCTCTGTAGGTGCAGCTCCGTATGTCCACCTTATCAACCGTGATGAGTTCGAACAGTACCACGTAGTATTCACAGGGACCAGCATCAGGGTCTTCGACCTAGACGGTGTTGAGTACCCGGTGGACTACGAGAACAACTCACAGGCTTACATCCAGACTGCCAACCCAAGGGATGACCTGAGGATGGTCACGGTGGCAGACTATACGTTTGTCGTGAACCGTAAGCGGGTGGTGCAGGTCAACCCGAACAGTAAGAATGACGGTGGCGCATTCAACCCGAAGCAGGACGCACTGATTAACGTCCGTGGCGGTCAGTATGGTCGAACCTTGAGTGTAAGCATCAATGGGGGCACACAGGCTTCCTACAAGATTCCTGATGGTGATAAGCCCACTGATGTTGGTAATACCGATGCTCAGTGGTTAGCCGAGGAGTTAGCGCGTCAGCTCCGAGCGAATACCCCAGGGTGGGCCTTCCACGTAGGACAAGGGTATATCTGGATTGTTGCCCCGGCTGGTCAGGAGATTAACTCCCTGGTCACAAAGGATGGCTATGCAGACCAGCTTATCAGTCCCGTAACGCACTACGCTCAGTCGTTCGCGAAGTTGCCTATCAATGCCCCTGATGGGTACCGTGTGAAAATCGTTGGGGATACCTCTAAGACTGCCGACCAGTATTACGTTCGGTACGATGCGACCCGCAAGGTCTGGTCAGAGTGTCCAGCCTGGAACATCACCACTCAGTTCTACCTTGAGACCATGCCTCATGCGCTGGTCCGTAAGGCAGACGGACGGTTCGCTTTCCGTTGGAACTCGTGGAATGCTCGTAGTGCTGGTGACGACGATACCAACCCGTATCCGTCCTTTGTGGACAACACCATCAACGATGTGTTCTTCTTCAGGAACCGCTTAGGCTTCCTCTCTGGTGAGAATATCATCCTGTCCAGGACCGCTAAGTATTTCAACTTCTTCCCACCTTCAGTGGCGAACCTGAGCGACGATGACCCTATCGACGTTGCAGTCAGTCACAACCGTGTGTCGACCTTGAAGTACGCCGTACCGTTCACTGAGGAGCTTCTCCTGTGGTCGGACGAGGCGCAGTTCGTGTTGGGTGCTTCTGGCATCCTGTCCAGTAAGACCGTTGAGCTTAACCTGACGACTCAGTTCGATGTCCAGGATAAGTCCCGACCTTACGGGATTGGACGTAACGTGTACTTTGCGTCACCTCGTGCTACCTACACGTCCATGAGCCGATACTATGCAGTCCAGGATGTATCAAGCGTGAAGTCCGCTGAGGACATTACGGCCCACGTACCGAACTACATTCCGAATGGTGTGTTCAGTATCTCCGGGACATCCTCTGAGAACTTCGCCACGGTGCTGACCAGTGGGGCCAAAGGTAAGGTGTTCATCTACAAGTTCCTCTACCTGGATGAAGAACTCCGCCAGCAGTCCTGGTCTCATTGGGACTTCGGGGATAACGTTGAGGTACTCGCAGCGAACTGTATCGGGTCCCGGATGTATATCCTGATGCGTAACCAGTTCAACCTGTGGTCCTGTGAGGTGAACTTCACGAAGGAGTCAATCGACTACGATATCGAGCCATACCGTGTCCACCTGGACATGAAGAAGGCTTACACGATTCCTAGTGACGCCTTTAACGAAGATACCTTCCAGACCAGTCTCAGCATCTCTGCGGTGTACCAGTCGAACTTCCAGAGAGGGTCTGTCACTATTGTGGAGGCCGATGGTAAGACTACGACCATCCCTGCGCCTGAGGGAGGCTGGAACAGTAGCCCTTGGATATCCCTTGATGGTAACCTTGCTGGTAAGACCGTTATCATCGGGTTCAACTACGAGTTCCGTTACGAGTTCTCTAAGTTCCTCATTAAGAAGGCGGCTGATGATGGCTCAACGGCTACCGAGGACATTGGACGCTTACAGCTCCGCCGTGCCTGGCTGAACTACGAGCGCTCTGGGGCATTCACCATTCAGGTGCAGAACCTCAGCAGGGTCTTTGAGTACGACATGGCTGGTGGACGCTTAGGCTCCGACAACCTGCGAATCGGTAGGCTGAACCTGGGTACCGGGCAGTATCGTTTCCCTGTGGCAGGTAACGCATCGTACAACACAGTTATCCTTATCAGCGACAATACAACTCCACTCAACGTGATTGGTTGTGGCTGGGAAGGTAACTACATTCGCCGCTCAAGCGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4b7c0d814111f3c9b156825147475c32b11f8837ded48e21092880689a98bf06
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3272
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage Apdecimavirus NJ2 which infects Enterobacter cloacae Liu,Y. 2012-11 — GenBank