Protein

View in Explore
Genbank accession
YP_010739164.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,59
Protein sequence
MAFVTGTAANHVDALDKLRLFLTSDDALSSLGQTWAQLRWVPDNVDSVDTNIPFGSGVQLPRLFRPDYRTQNYTSETGGQYLSSTSFTSGQYVRLKMRAAKAVTKFTLKAGTGSSLTNYTPRNFRLEYSDDGSTWSTAATLTDQRAWVANEERTFSVPSTGEHLWWRLVTLQTGDYQGTLTGAYWELRSIWLYDGDVLVSSSESNLVVKGPGLAGDEEIFLAFRTTYNTGTGEYAILVQGLTGYLPAEQSLHKQPGLHPSGWPVVPLWSAAMPYWFVGSGRRVVFVFKVSTVFESGYAGFFLPYASPEQYPYPLAIGGSMSPASSSYRYDYVSAAHSCFVMPGGNTGTSSSVDVVYNTTLNVMLPDGSWFDFQNRPTTSSNNSESYLTWNNSPASVLPHGTFNDSTSSGYGFRENIGGGFSVFPATLFQRRTAGRFLGELDGCFQISGFQNGSENTGTIAGEDYLVFQNTYRTDVREYWALKAE
Physico‐chemical
properties
protein length:484 AA
molecular weight: 53317,38120 Da
isoelectric point:5,19397
aromaticity:0,14050
hydropathy:-0,28430

Domains

Domains [InterPro]
DC_0072
STR
1–112
DC_0072 DC_0072
G3DSA:2.60.120.260
STR
68–193
G3DSA:2.60.120.260
IPR008979
STR
80–155
IPR008979
DC_0072
STR
107–170
DC_0072
YP_010739164.1
1 484
Architecture
STR
STR 1-484
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage vB_Xar_IVIA-DoCa10
[NCBI] 		2975529 Uroviricota > Caudoviricetes > Mesyanzhinovviridae > Bosavirus > Bosavirus Doca10
Host Xanthomonas arboricola pv. juglandis
[NCBI] 		195709 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas arboricola

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010739164.1 [NCBI]
Genbank nucleotide accession
NC_073036 [NCBI]
CDS location
range 27174 -> 28628
strand +
CDS
ATGGCCTTCGTAACAGGCACGGCCGCCAACCATGTGGACGCGCTGGACAAGCTGCGCCTGTTCCTGACCAGCGACGACGCCCTGTCGTCGCTTGGTCAGACCTGGGCCCAGCTGCGGTGGGTGCCCGACAACGTGGACTCGGTCGACACCAATATCCCGTTCGGCTCGGGCGTCCAGCTGCCGCGCCTGTTCCGGCCGGACTACCGGACCCAGAACTACACCTCGGAGACCGGCGGTCAGTACCTGAGCTCCACGTCGTTCACCTCCGGGCAGTACGTCCGCCTGAAGATGCGCGCCGCCAAGGCGGTGACCAAGTTCACCCTGAAGGCCGGCACGGGCTCGAGTCTCACGAACTACACCCCGCGCAACTTCCGACTGGAGTACTCGGACGACGGCTCAACCTGGTCGACCGCCGCCACGTTGACCGACCAGCGGGCCTGGGTGGCTAACGAGGAGCGCACCTTCTCGGTGCCCTCTACCGGCGAGCATCTGTGGTGGCGTTTGGTCACCTTGCAGACCGGCGATTACCAGGGCACGCTGACTGGGGCGTACTGGGAGCTGCGCTCTATCTGGCTGTATGACGGCGACGTCCTGGTATCCTCCTCGGAGTCCAACCTGGTAGTCAAGGGCCCAGGCCTGGCAGGCGACGAGGAGATCTTCCTTGCCTTCCGTACCACCTACAACACCGGCACCGGCGAGTACGCCATCCTGGTACAGGGGCTCACTGGCTATCTGCCGGCTGAACAGTCCCTGCACAAGCAGCCCGGCCTGCACCCGAGCGGGTGGCCGGTAGTGCCCCTCTGGTCGGCGGCCATGCCGTACTGGTTCGTCGGTAGCGGCCGGCGGGTGGTCTTCGTGTTCAAGGTGTCTACTGTCTTCGAGTCGGGGTACGCCGGGTTCTTCCTGCCGTACGCCTCTCCGGAGCAGTACCCCTACCCCCTGGCTATCGGCGGGTCCATGTCGCCCGCGTCGTCGAGCTACCGGTACGACTACGTGTCGGCGGCGCACAGCTGCTTCGTCATGCCCGGCGGAAATACCGGCACCAGCTCAAGCGTGGACGTGGTGTACAACACCACCCTCAACGTCATGTTGCCCGACGGGAGCTGGTTCGACTTCCAGAACCGGCCCACGACCAGCAGCAACAACTCCGAGAGCTACCTGACCTGGAATAACTCTCCGGCCAGTGTGTTGCCGCACGGCACCTTCAACGACAGTACCTCTTCGGGCTACGGCTTCCGCGAGAACATCGGAGGCGGTTTCTCGGTCTTCCCGGCGACGTTGTTCCAGCGTCGTACGGCCGGCCGGTTCCTCGGCGAGCTGGACGGCTGCTTCCAGATCTCGGGATTCCAGAACGGCTCCGAGAACACCGGCACCATAGCGGGCGAGGACTACCTCGTCTTCCAGAACACCTACCGGACCGACGTACGAGAGTACTGGGCCCTCAAGGCGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
735322e831f290917da9de2094342ab995b304de27fd3fadda591c705a613653
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7242
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative analysis of new lytic phages for the biological control of phytopathogenic Xanthomonas spp. Domingo-Calap,M.L., Bernabeu-Gimeno,M., Aure,C.M., Marco-Noales,E. and Domingo-Calap,P. 2022-12-21 — GenBank