Protein

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Genbank accession
QTZ82904.1 [GenBank]
Protein name
minor structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,64
Protein sequence
MSLMKMESVKNLTNTNDKKYIRLIAPSVITNTYSALVTSEFSIVNDKKYILHFKAIVYKDINIKIKFRKNTGEIVDIGEINLNDCEVIQSVNGRNEYHCIFRFLNTFNSTGNILIGVDLNSSFVPKEKIMDIREVALQQGILLLPYTPGTEEITNTTTELNSKFELLAEKVKTSVSKIEGSIADSVESIATVKQEVDNLEINFDKNIKNSSGKNFVGNSEFASMDLTNWSKWGSGITPIVWGGNIQSGHEYACKITTTDTNQGLEQQITGLEIDEWYTCSCKVWTESGVQGICVRNAGVWNGEIFEGDNNKWTTIKFTFQAKENTTWIHLGSINSNCVNGVTWFTGIQIRKGTKLLNWIPNSNELYSAHYRFDKDGMKGEFEDGTYASMGRKGFSWFDSANMSHAYHCLMEVGVFNLMQHGNGNWTKVKIQLPAYFKNKYFRAMVAPSGYSIGQSSLDTLTVLVESYDIENATFTIQALGHSQNGEYQNNINISWMVTA
Physico‐chemical
properties
protein length:499 AA
molecular weight: 56148,81660 Da
isoelectric point:5,81312
aromaticity:0,10621
hydropathy:-0,30060

Domains

Domains [InterPro]
DC_1677
STR
126–210
DC_1677 G3DSA:2.60.120.260
Coil
Unmapped
182–202
Coil G3DSA:2.60.120.260
IPR008979
STR
213–329
IPR008979
QTZ82904.1
1 499
Architecture
STR
STR 126-355 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QTZ82904.1
1 499
Domain Start End Length (AA) Confidence
N-terminal 1 94 94 0,0568
Central domain 95 293 200 0,2280
C-terminal 294 499 205 0,7009
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-94
Central
95-293
C-terminal
294-499

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCp-D
[NCBI] 		2814704 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QTZ82904.1 [NCBI]
Genbank nucleotide accession
MW478291 [NCBI]
CDS location
range 16828 -> 18327
strand +
CDS
ATGAGTTTGATGAAAATGGAATCTGTAAAGAACCTTACTAATACTAATGATAAAAAATATATAAGACTTATAGCTCCTTCTGTCATAACTAATACTTACTCAGCTTTAGTAACAAGTGAATTTAGTATTGTAAATGATAAAAAATATATATTACATTTCAAAGCTATAGTTTATAAAGATATTAATATAAAGATTAAATTTAGAAAAAATACTGGTGAAATAGTTGATATTGGAGAAATAAATTTAAATGACTGCGAAGTAATTCAAAGTGTTAATGGAAGAAATGAATACCATTGTATTTTTAGGTTTTTAAACACCTTTAATTCAACTGGTAATATTCTAATAGGTGTAGATTTAAATTCAAGTTTTGTTCCAAAAGAGAAAATTATGGATATAAGAGAAGTAGCTTTGCAACAAGGTATATTATTACTTCCATATACTCCTGGAACCGAAGAAATCACTAATACAACTACAGAATTAAATTCTAAGTTTGAATTATTAGCTGAAAAGGTAAAAACTTCTGTATCAAAAATAGAAGGATCTATTGCAGATTCTGTTGAAAGCATAGCAACAGTTAAACAAGAAGTTGATAACCTTGAAATTAATTTTGATAAAAACATAAAAAATTCTTCAGGTAAAAACTTTGTTGGTAACTCTGAGTTTGCTAGTATGGACTTAACAAATTGGTCCAAATGGGGAAGTGGTATAACTCCTATTGTTTGGGGTGGTAATATTCAAAGTGGTCATGAATATGCTTGTAAAATAACTACAACAGATACTAACCAAGGATTAGAACAGCAAATAACAGGATTAGAAATCGATGAATGGTACACTTGTAGCTGCAAAGTATGGACTGAAAGCGGAGTGCAAGGTATTTGTGTCAGAAATGCTGGTGTATGGAATGGTGAAATATTTGAAGGAGATAATAATAAGTGGACAACTATCAAATTTACTTTTCAAGCTAAAGAAAATACCACATGGATACATTTAGGATCTATTAATTCAAATTGTGTAAATGGAGTAACTTGGTTTACTGGAATTCAAATTAGAAAAGGAACTAAACTTTTAAATTGGATTCCAAATTCAAATGAATTATATAGTGCTCATTATAGATTCGATAAAGATGGTATGAAAGGTGAATTTGAAGATGGCACTTACGCAAGTATGGGAAGGAAAGGTTTCTCATGGTTTGATAGTGCAAATATGTCTCATGCATATCATTGTCTTATGGAGGTTGGAGTTTTTAATCTAATGCAACATGGAAATGGTAATTGGACAAAAGTTAAAATTCAATTACCAGCTTATTTCAAAAATAAATATTTTAGGGCAATGGTAGCTCCATCAGGTTATTCAATAGGTCAAAGTAGTCTTGATACTTTAACTGTTCTTGTTGAAAGTTATGACATTGAAAATGCAACTTTCACAATACAAGCTTTAGGTCACTCTCAAAATGGGGAGTATCAAAATAATATCAATATTTCGTGGATGGTTACAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
438af9949ad6fedfd97f11249eb9578f9148d8b67f2d4db62264a96cb809c79b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7727
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of four temperate phages infecting Clostridium perfringens and evidence of pseudolysogeny involving large plasmid-like prophages Allen,M.-M., Sbaghdi,T., Garneau,J.R., Duclos,A., Alix-Pare,O., Gaucher,M.-L., Labrie,S.J. and Fortier,L.-C. 1990-11 — GenBank