Protein

Genbank accession
ADO99519.1 [GenBank]
Protein name
fiber
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,67
Protein sequence
MSLTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYIVDNRPGEVLYTNTAPIDANSNLDLTSPNNVLHKFNSVEGGIIVPRGCSLVGTDLRRTKVIPKYVPYPTIYAAKGINTEDQVPPRTSIFRVTGGTYFWQFSFFDGAEEGVYFKPDSTETLAPKFSHHRLTCFEFADGLNPLSKLISDGSVPNADYSAVPNILERTDLEIYYQKVSKAFATIPDTSGDPSTDQIQARVEENRIVGPISDEYRVLQITRNGQTATAVTVDEFDNPRDHGFSVGVNINVSGVTGSTGPQSELDASVYNGSFTVTSASGNVFTYQMQSEPTGNAVGSNITVKTEIDTVDSASPYAFNLSLRSVWGMNGMNANGSKATGFKSMVVAQFTGLSLQKDDRAFVRYNASTGNYDVATSGDGAHLDGFAEYRKGWGHRHIVCSNDSFIQAVSVFAVGYDTHFTAESGGDMSITNSNSNFGNTALRSAGFKAKSFSKDKAGAVTHIIPPKALSVISTTATGTSGASSITLANDGSINGIIQGMNVTGSGVGVGATVGSVNTNTRVVTLTATNTTAINGNVIFGEETSVNWVNIDIQRTKVINQSLAGSGGSPGSRLYLYGYTVEASPPTNKVQGFTVGARQDGTGANAVADKINCLLVANGAATATTQSATISPYGPSVSGLKAGVDGSPLQFDSATYTINGQAGSVGGWYLSVTADADPNSDTYNRIYNTLTTNNDYNNVNFTPTTFLKRIADGRNLQDRTYRIRLVIDKDKTNPLPRDPLSGYVMQPLNSDTTSYNLQNTFYIYDIEVVQEFERGIADGIYYITLLYASVAPSTSNFNNRKFSQNVNEVYPTFDRDNPVADPLAAVSVADNQTIGLVNATDGATPPAKDPKLSITKEAIVKMLTDTGWTQPGTTPGYESATARLSNVELTARAGDEEERKINIRNNNDGTVSPIPVEFRRHSILRSGNHTFEYLGFGPGNYSTAFPQTQVETLSADQIKFSQSIKEEAGVAFYSGLNSNGDLFIGNQVINPVTGQITNEDIAQLNVVGEENTTIETFSELVLTDKLTVIGGASNQLESIFAGPVTFQGQTTFTNNLSAKKISYFNQDGTVVKQTLLAPADANGQPSFANITGYTTPADGDLVYNINWTPGKSLGWIYYGGAWKEFGLTDTGQINIDTFNNNQHIGLGVAPTADYRVNVNGSARVDGDLIVTGRGGVGPDKYITKTYTGDGTTLTFAITTYTGVQHVDDSVLVFLNGVAQIAGTNYTVDSNGANVVFSSGDAPLASDTVHIVEMPI
Physico‐chemical
properties
protein length:1325 AA
molecular weight: 142079,41360 Da
isoelectric point:4,89244
aromaticity:0,09208
hydropathy:-0,26023

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Syn19
[NCBI] 		445684 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8109
[NCBI] 		166314 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADO99519.1 [NCBI]
Genbank nucleotide accession
GU071106 [NCBI]
CDS location
range 27356 -> 31333
strand +
CDS
ATGTCCCTTACTAGACTTAAGAATATTATTACGTCCAGAACTGGACGTATCATCTATGTCAACCCTGACGACTTCGATGCCTCTGATGCTATTGACAACAGAGGTAACTCTGCACTGAGACCGTTTAAGTCTATCCAGAGAGCATTTCTTGAAGTTGCAAGATTCTCCTATCGAGTGGGTCTGTCGAACGACGAATTCGACGCCTTCTCGATTATGCTGTATCCAGCAGAATATATTGTAGATAATCGTCCTGGTGAGGTTCTGTATACTAATACAGCACCTATTGATGCAAACTCAAACCTTGACTTAACTTCTCCTAATAATGTTCTTCATAAGTTCAATTCTGTAGAAGGAGGGATCATTGTTCCCAGAGGTTGTTCGCTGGTTGGAACCGATCTTCGTCGTACCAAGGTTATTCCTAAGTACGTTCCTTATCCTACGATCTATGCTGCTAAGGGTATCAATACAGAAGATCAAGTACCTCCCCGCACCTCGATCTTCAGGGTTACTGGTGGAACATACTTCTGGCAGTTCTCCTTCTTCGATGGTGCTGAGGAAGGTGTATACTTCAAACCTGATAGCACAGAAACATTAGCACCTAAGTTTTCACATCACAGACTCACTTGCTTTGAGTTTGCTGATGGTCTTAATCCCCTTTCTAAGTTAATCTCTGACGGCAGTGTTCCTAACGCAGATTATTCTGCTGTGCCTAACATCTTAGAAAGAACTGACCTGGAGATTTATTATCAAAAGGTATCTAAAGCATTCGCTACAATTCCTGATACATCTGGTGATCCCTCAACTGACCAGATTCAGGCAAGGGTCGAAGAAAACCGTATTGTTGGTCCTATTTCCGATGAGTACAGAGTCCTTCAGATCACAAGAAATGGTCAGACAGCAACGGCGGTCACTGTTGACGAGTTTGATAACCCCAGGGACCATGGATTTTCCGTTGGTGTTAACATTAACGTTAGTGGAGTTACTGGATCTACTGGACCGCAATCCGAACTTGATGCATCAGTTTACAACGGATCTTTCACAGTCACATCCGCATCTGGTAACGTCTTTACTTACCAAATGCAATCTGAACCAACAGGTAACGCAGTCGGATCAAACATCACTGTAAAGACTGAGATTGATACTGTTGACTCTGCATCTCCATATGCGTTCAACCTGTCACTCCGCTCGGTGTGGGGTATGAATGGTATGAATGCTAATGGTAGCAAAGCAACTGGTTTCAAATCAATGGTTGTGGCGCAGTTCACTGGTCTGTCACTGCAAAAAGATGATAGAGCGTTCGTAAGATATAATGCCTCTACTGGTAACTATGATGTAGCAACATCTGGCGACGGTGCTCACTTAGATGGTTTTGCTGAGTATCGTAAAGGTTGGGGACACAGACACATTGTCTGCTCTAATGACTCATTCATTCAGGCAGTTTCGGTGTTCGCTGTTGGATATGACACACACTTCACTGCTGAGAGTGGCGGTGACATGTCAATTACAAACTCTAACAGTAACTTTGGTAATACCGCTCTTAGATCTGCTGGATTCAAAGCAAAATCATTCTCGAAAGATAAGGCAGGCGCAGTCACTCATATCATTCCACCCAAAGCATTATCGGTTATTTCTACAACTGCAACGGGTACTTCTGGTGCATCATCGATCACTCTCGCTAACGACGGTTCGATCAATGGTATCATCCAAGGCATGAATGTTACAGGATCTGGTGTTGGCGTTGGTGCCACCGTTGGTTCTGTGAATACAAACACTAGAGTCGTCACGTTAACTGCTACAAATACTACTGCAATTAACGGCAACGTTATCTTTGGTGAAGAAACATCAGTTAACTGGGTAAACATTGACATACAAAGAACAAAAGTCATCAACCAATCCCTTGCAGGATCTGGAGGATCCCCTGGATCTAGACTCTATCTCTACGGATATACTGTTGAGGCATCACCTCCAACAAATAAAGTCCAAGGTTTCACCGTTGGTGCTCGTCAGGACGGCACGGGCGCTAATGCTGTCGCGGACAAGATTAATTGCTTGCTTGTAGCAAATGGTGCAGCGACTGCTACAACACAATCTGCAACTATCTCACCATATGGACCTAGTGTTTCTGGTCTAAAAGCAGGTGTTGATGGTTCACCGCTTCAATTTGATAGTGCTACTTATACTATCAATGGTCAGGCAGGTAGTGTTGGTGGTTGGTATTTGTCTGTAACAGCAGATGCTGATCCTAATAGTGATACTTACAATAGAATTTACAATACACTTACTACAAACAACGATTATAATAACGTAAACTTCACTCCTACTACATTCCTGAAGCGTATTGCTGACGGTAGAAACCTTCAGGATAGAACGTATCGCATTCGTCTGGTTATTGATAAGGATAAGACTAATCCTCTGCCTCGTGATCCCCTCTCTGGTTATGTAATGCAACCATTGAATAGTGATACGACATCATACAATCTGCAAAATACTTTCTACATCTACGATATTGAAGTTGTACAAGAGTTCGAGCGAGGTATTGCCGATGGAATCTACTACATTACCCTCCTTTATGCATCTGTTGCTCCTAGCACAAGTAACTTCAACAACAGGAAGTTCTCTCAAAACGTCAACGAAGTCTATCCTACGTTTGACAGAGACAACCCTGTTGCTGACCCTCTTGCTGCTGTATCCGTCGCTGACAACCAAACTATCGGTCTAGTAAATGCTACCGATGGTGCTACACCACCTGCAAAAGATCCTAAGTTGTCTATCACTAAGGAAGCAATCGTTAAGATGCTGACTGATACTGGATGGACACAACCAGGTACAACTCCTGGATATGAATCTGCAACAGCGAGACTATCTAATGTTGAATTGACTGCTCGTGCAGGTGATGAAGAAGAGAGAAAGATTAACATCCGTAATAACAACGATGGAACTGTTTCTCCTATCCCCGTTGAGTTTAGACGCCACTCGATTCTGAGATCTGGTAACCATACATTTGAATATCTTGGTTTCGGTCCTGGTAACTACTCGACTGCATTCCCGCAGACTCAGGTAGAAACTCTGAGTGCTGATCAGATTAAGTTCTCTCAGTCAATTAAAGAAGAAGCAGGTGTTGCTTTCTACTCTGGTCTTAACTCTAACGGTGACCTGTTTATTGGTAACCAGGTTATCAACCCTGTTACAGGTCAAATCACAAACGAAGATATTGCACAACTGAATGTTGTTGGTGAAGAGAATACAACTATTGAGACATTCTCTGAGTTGGTTCTTACTGACAAACTCACGGTTATCGGTGGTGCATCTAACCAGTTAGAATCTATCTTCGCTGGTCCTGTTACATTCCAAGGACAAACTACCTTCACAAATAACCTTTCTGCTAAGAAGATTTCGTACTTCAACCAGGATGGCACGGTCGTCAAGCAAACCTTATTGGCACCAGCAGATGCAAATGGACAACCCTCTTTTGCTAATATCACGGGATACACTACGCCCGCTGATGGTGATCTTGTTTATAACATTAATTGGACACCAGGCAAGTCGCTTGGTTGGATATACTACGGTGGAGCATGGAAAGAATTTGGTCTCACAGATACTGGTCAGATTAATATTGATACTTTCAATAACAATCAACACATTGGTCTTGGTGTTGCTCCTACAGCTGATTATCGCGTAAATGTAAACGGTAGTGCAAGAGTTGATGGTGACTTGATTGTCACTGGTCGTGGCGGTGTTGGTCCCGACAAATATATTACTAAGACATATACAGGTGATGGAACAACCCTAACCTTTGCTATTACTACCTATACAGGTGTTCAGCACGTTGACGATTCTGTTCTGGTATTCCTGAACGGTGTTGCTCAAATTGCAGGAACAAATTATACTGTGGACTCTAATGGTGCAAACGTTGTATTCTCTTCTGGAGATGCACCTTTGGCATCGGATACAGTTCATATTGTCGAAATGCCTATCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
b38a20935318e52afb0fb6b4c0c9d5c071637e336a818fe1085aac3f4658fb47
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3799
Evidence 0,3799
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage Syn19 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank