Protein

View in Explore
Genbank accession
WKL13443.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
Protein sequence
MFETRVKGRYTVTHLKATGEVLAQYTFDNLITNAGLDWICAMDTSDLFSQALAVSTSTADPNPAAPSLPEEVRRTTSYAPNGDVTSGLDGEWIYWHKRWRFPIGTLTGQVLATVGIVAQSEVGFESNTGAKIPAGTPLSYTRIKDAAGQPTTLVVQADEILDVQYELRSKAVAMAEAKFVISGVERTIRLTPLPFANRRNLYGERYIFYNASPRIDGKNASGSDVQDGQWVKLYPRYTRGTYKGQLMLRATVDNGNMPGGITGCKDLKIYNGRNYALTIDPPVVKNNTQEFSITMEFSVARA
Physico‐chemical
properties
protein length:302 AA
molecular weight: 33240,19570 Da
isoelectric point:8,39154
aromaticity:0,09603
hydropathy:-0,29139

Domains

Domains [InterPro]
DC_1185
STR
1–302
DC_1185
WKL13443.1
1 302
Architecture
STR
STR 1-302
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeA_SB
[NCBI] 		3058943 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKL13443.1 [NCBI]
Genbank nucleotide accession
OR208619.1 [NCBI]
CDS location
range 15404 -> 16312
strand -
CDS
ATGTTTGAGACACGTGTTAAGGGTCGCTACACCGTGACCCATCTGAAAGCCACGGGTGAAGTCCTGGCACAGTACACCTTCGACAACCTCATCACTAACGCGGGTCTTGACTGGATTTGCGCCATGGATACCTCAGACCTGTTCTCTCAGGCCCTGGCCGTAAGCACCAGCACAGCAGACCCCAACCCCGCCGCACCATCCCTACCGGAGGAAGTACGACGGACCACATCGTACGCCCCTAACGGGGATGTGACCTCGGGTCTGGATGGGGAGTGGATTTACTGGCACAAGCGGTGGCGCTTCCCGATAGGCACTCTTACCGGACAGGTACTGGCCACCGTGGGAATCGTGGCCCAATCCGAAGTCGGGTTCGAGAGTAACACTGGCGCGAAGATTCCGGCAGGAACTCCGCTGTCCTACACCCGGATCAAGGATGCCGCCGGCCAACCTACCACCCTGGTAGTTCAGGCCGACGAGATTCTCGACGTGCAGTATGAGCTGCGCAGCAAGGCCGTGGCGATGGCCGAGGCCAAGTTCGTGATCTCCGGGGTCGAGCGTACCATCCGCCTTACTCCACTGCCATTCGCGAACCGGCGTAACCTCTACGGTGAGCGCTACATCTTCTACAACGCGAGTCCTCGGATTGATGGTAAGAATGCGTCCGGCTCGGATGTCCAGGATGGCCAGTGGGTGAAGCTATACCCGCGATATACGCGGGGCACCTACAAGGGGCAGCTAATGCTGCGGGCCACCGTTGATAACGGCAACATGCCGGGAGGCATCACCGGCTGCAAGGACCTGAAGATTTACAACGGTCGGAACTACGCACTCACCATCGACCCGCCTGTAGTCAAGAACAACACGCAGGAGTTCTCCATCACGATGGAGTTCTCGGTAGCGAGGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dd762b68092ae714b72a2be3e5dd397d1a475e4ff577b6bcd6e9bc789876ae45
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7880
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage discovery pipeline from phage isolation to preparation of emergency patient therapy: An example of a Pseudomonas phage therapy preparation workflow Wuerstle,S., Lee,A., Kortright,K.E., Winzig,F., An,W., Stanley,G.L., Rajagopalan,G., Blazanin,M., Hajfathalian,M., Bollyky,P., Turner,P.E., Koff,J.L. and Chan,B.K. 2023-05 — GenBank