Protein

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Genbank accession
XVB93772.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSEYLYPWNPFQDDDDARITGELASVPGGTRVLVVPRAAPFFSENLTIVNSDTNAPLVLGEDYVFSYPFMDFIKNYSKNVYGGIILLKATTALNISISYDTIGGPFVLDDVAYAEAVANIIASGRLADWSQVINLPSGFPADPHDHPESQTYNYNAFMANLTLLIEAMNNETNNPTVQTLLTQHSADNLRIAHPNGEPEDVGLSNLHDYPVAQESDFDGNSNQLYMVLGITKKLIDKMLAEFLNGSLPADFEETVQEIYDQMNSYLQQTATLAGQVDNKLSNTINGLETFDNGATLKSTKDMLFHTPTNSWYYWGGTYPTGGYVVSGGASPYDASGNLIAGWKVAGAVELETRLSSQTIGLGGDIVGYTAVAGAIARTVNDRLRDAISVRDYYQSTDNGNWALAYNRAKAVNPKVFFPRQAGVYIVSTTLVVDSGGAILSDGAIIGSPVSANAEATAIITVISATSVTDIELAGFTVNGGVNDTQTTANVKSAISLNSCVGVRIGNVKVVNCSGRGIHLDTCADVTVSDYRFRKFNYTTASLNTTLAANRNGIKFVDCSDVYVNGVDIDSDDMCVRISAKSVAINNVNVNGVKGTSTTSSLVGFAEELNSGSTYYSQNVTGIRIKDVRLLYGKSANGLVSVTKLGASSVLKDFSIIGVSGKPTSGNGLTVNGVTGVEFDDINVESVNGHGVHIASSTLVKGTVKGRTDASASYGVNLNAVSFSELIVNSANSSGYGINLDGVTYSVIKPSAYNCGAGLFSTSAGGGCRMVNCTNVNLPEGNLYGTTTVSYYGLNYSTGNTGCTFGLDLMFYGLVPSTRLPTAYYLKTPAVSLKFKEDSAGTLSVYSNIGCTLTRNAAGNYTVAFSSNMNSTGFQWALEAYHNGARRTIQLSSAVTVGGFSFLTQDAAGTTTYADHVSLVAWNT
Physico‐chemical
properties
protein length:923 AA
molecular weight: 97949,98270 Da
isoelectric point:4,83321
aromaticity:0,09209
hydropathy:-0,02719

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
283–357
G3DSA:2.10.10.80 IPR012334 DC_0499
G3DSA:2.10.10.80
ATT
290–357
G3DSA:2.10.10.80 IPR011050
DC_1082
ATT
351–395
DC_1082
XVB93772.1
1 923
Architecture
ATT
STR
STR
ATT 283-395 | STR 396-627 | STR 641-923
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XVB93772.1
1 923
Domain Start End Length (AA) Confidence
N-terminal 1 400 400 0,9959
Central domain 401 815 416 0,9926
C-terminal 816 923 107 0,9881
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-400
Central
401-815
C-terminal
816-923

Taxonomy

  Name Taxonomy ID Lineage
Phage Raoultella phage VB_ZK_P1
[NCBI] 		3425683 Viruses > unclassified bacterial viruses >
Host Raoultella ornithinolytica
[NCBI] 		54291 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVB93772.1 [NCBI]
Genbank nucleotide accession
PV662128.1 [NCBI]
CDS location
range 101275 -> 104046
strand +
CDS
ATGTCAGAATATTTATATCCTTGGAATCCCTTCCAAGATGATGATGACGCCCGTATCACTGGAGAGCTCGCGAGTGTACCCGGGGGAACCCGTGTGCTGGTCGTTCCTAGAGCCGCTCCTTTCTTTTCCGAAAACTTAACCATTGTCAATTCGGATACTAATGCCCCGCTGGTATTAGGCGAAGACTACGTCTTCAGTTATCCGTTCATGGATTTTATCAAGAATTATTCCAAAAACGTTTATGGTGGGATAATTCTTCTCAAAGCAACCACGGCTTTGAACATTTCAATAAGTTATGACACCATTGGCGGGCCGTTCGTTTTAGACGACGTTGCATACGCTGAAGCCGTGGCTAACATCATTGCGTCTGGGAGATTGGCAGATTGGAGTCAGGTTATCAACCTGCCTTCTGGTTTCCCAGCCGATCCCCACGACCATCCTGAAAGCCAGACTTATAACTATAACGCGTTCATGGCTAACCTCACTCTGTTGATTGAGGCGATGAACAATGAAACGAATAACCCAACTGTCCAGACTCTGCTGACACAGCACAGCGCCGATAACTTAAGAATCGCGCATCCCAACGGTGAGCCAGAGGATGTGGGATTAAGCAATCTTCATGATTATCCCGTGGCTCAAGAAAGTGATTTTGATGGTAATTCCAACCAGTTATATATGGTTCTGGGTATTACGAAGAAACTCATCGATAAAATGCTGGCTGAGTTCTTGAACGGATCACTACCTGCTGATTTCGAAGAAACGGTTCAAGAAATCTACGATCAAATGAACTCTTACTTGCAGCAAACGGCTACGCTTGCTGGGCAAGTTGATAACAAGCTGTCGAACACCATCAACGGTTTGGAAACGTTCGATAATGGCGCGACACTGAAGTCAACCAAGGATATGTTATTCCATACCCCAACTAACAGTTGGTACTATTGGGGCGGGACTTATCCTACTGGCGGTTACGTTGTCAGCGGCGGGGCTTCCCCTTACGATGCTTCAGGTAATCTGATAGCCGGTTGGAAAGTGGCGGGGGCAGTTGAGCTTGAAACCAGACTCTCTTCACAAACTATCGGCCTGGGTGGGGACATCGTAGGTTACACGGCAGTGGCTGGAGCAATAGCCCGTACGGTGAACGACCGACTCCGGGATGCGATTAGCGTAAGAGACTATTATCAAAGTACTGATAACGGTAACTGGGCTTTGGCTTATAATCGGGCTAAAGCGGTTAACCCTAAGGTGTTTTTCCCTCGGCAAGCCGGGGTTTACATCGTTAGCACCACTCTTGTGGTCGACTCTGGCGGCGCGATACTTTCAGATGGTGCGATCATAGGGTCTCCTGTTTCGGCCAACGCCGAAGCCACGGCGATTATTACGGTAATTTCGGCGACGTCTGTGACCGACATAGAACTGGCCGGGTTCACTGTTAACGGTGGTGTTAACGACACCCAAACTACGGCTAACGTAAAATCAGCGATCTCCTTAAACTCTTGCGTTGGTGTAAGAATCGGTAACGTTAAGGTGGTCAATTGTTCTGGCCGAGGGATTCATCTCGATACCTGCGCCGACGTAACAGTAAGCGATTATCGTTTCCGTAAATTTAATTACACCACCGCATCGCTCAACACTACTCTGGCGGCCAATAGAAACGGGATTAAATTTGTCGACTGTTCCGACGTTTATGTAAATGGGGTGGACATTGATTCCGACGACATGTGCGTGAGAATCAGCGCTAAATCTGTTGCAATTAATAACGTGAATGTAAATGGGGTTAAAGGAACCTCCACTACGAGTTCTTTGGTTGGGTTCGCAGAAGAGCTTAATTCAGGATCTACTTATTATTCACAAAACGTAACTGGGATTAGAATAAAGGACGTTCGTTTATTATACGGTAAATCGGCTAACGGTCTGGTTAGTGTTACTAAATTGGGAGCGTCCTCCGTCCTAAAAGATTTTTCAATCATTGGCGTGTCCGGCAAACCAACCTCTGGAAACGGTTTGACTGTTAACGGCGTGACGGGGGTTGAATTTGACGACATCAACGTGGAGTCCGTAAACGGCCACGGGGTTCATATTGCTTCCTCGACGCTTGTTAAAGGCACCGTTAAGGGAAGAACAGATGCGTCTGCAAGTTATGGGGTCAATCTCAACGCCGTAAGTTTTTCTGAACTGATCGTTAATTCGGCCAATAGTTCAGGGTACGGTATTAATTTAGACGGAGTAACTTATTCTGTTATCAAACCATCTGCCTATAACTGCGGCGCCGGATTGTTCTCTACCTCGGCAGGTGGCGGGTGTAGGATGGTGAACTGTACTAATGTAAACTTACCGGAAGGTAATCTCTACGGTACAACCACAGTATCCTATTATGGTTTGAACTACTCCACTGGCAACACCGGATGTACGTTTGGTCTGGATCTGATGTTCTACGGTCTGGTTCCATCTACCCGTCTCCCTACGGCGTATTACCTTAAAACCCCGGCGGTCAGTCTTAAGTTTAAGGAAGATTCTGCGGGAACATTGTCGGTTTATTCCAACATCGGATGTACGTTAACCAGAAACGCGGCGGGTAACTACACGGTTGCTTTTTCAAGTAACATGAACTCAACGGGGTTCCAGTGGGCGCTAGAGGCTTATCACAACGGCGCGCGCAGGACGATCCAATTGTCTTCAGCGGTTACCGTCGGTGGATTTAGCTTCTTAACTCAGGACGCGGCGGGAACAACGACTTACGCCGATCACGTCAGTCTGGTCGCCTGGAACACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aeef7c11dfadc40aef5cc211a59bdd61105b8a6bdbb1bf43285b63a8b63a97f6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8505
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and identification of R. ornithinolytica phage and its targeted bacteriostatic effect on chilled pigeon meat Feng,S., Zhong,L., Zhou,J., Huang,Y., Sun,Y., Yuan,D. and Liang,W. 2025 — GenBank