Protein
View in Explore- Genbank accession
- CAI9865753.1 [GenBank]
- Protein name
- major tail protein
- RBP type
-
TSP
- Protein sequence
-
MHLPNGAQIFVETSRGDEIDASAVSNAERPVATVASKGDLAKGDYVIVTQSTWAKIVSRVLIVTDAQETEITLAGIDTSDTLVFPSGGTMSFAKITGWTEIPCVQEIGQDGGEQQYYTYQCLSDDKEQQIPTFKSAISLTYTFAHEFDNPIYPILRKLDASGQVTAVRMYVPKASEMRMWAGILSFNDIPSTQVNEMETVELSVSLKGDFTFVSSTLASPGA
- Physico‐chemical
properties -
protein length: 222 AA molecular weight: 24123,84510 Da isoelectric point: 4,45256 aromaticity: 0,08559 hydropathy: -0,08333
Domains
Domains [InterPro]
DC_0037
ATT
1–50
ATT
1–50
1
222
Architecture
ATT 1-50 | TAS 51-214 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
222
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 214 | 214 | 0,6546 |
| Central domain | 215 | 214 | 1 | 0,0422 |
| C-terminal | 215 | 222 | 7 | 0,9859 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (7 AA) is still below minimum (10 AA). Sequence may be too short.
C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (7 AA) is still below minimum (10 AA). Sequence may be too short.
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-214
1-214
Central
215-214
215-214
C-terminal
215-222
215-222
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage UP30 [NCBI] |
3044050 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAI9865753.1
[NCBI]
Genbank nucleotide accession
OX638287
[NCBI]
CDS location
range 18816 -> 19484
strand +
strand +
CDS
ATGCACTTACCAAATGGCGCACAAATTTTCGTAGAAACCTCTCGCGGCGATGAGATTGATGCTTCTGCGGTTAGCAATGCTGAGCGACCCGTTGCAACGGTAGCATCTAAGGGTGATTTAGCTAAAGGTGATTACGTTATTGTAACTCAGTCAACTTGGGCTAAAATTGTTAGCCGAGTCCTTATTGTGACCGACGCTCAAGAAACAGAAATTACACTGGCTGGAATTGACACATCTGATACTCTTGTTTTCCCGTCTGGCGGCACAATGAGTTTTGCAAAAATTACTGGTTGGACTGAGATTCCATGCGTGCAGGAGATTGGTCAGGACGGTGGCGAGCAGCAGTATTACACGTATCAGTGTTTGTCTGACGACAAAGAGCAGCAGATCCCGACTTTTAAATCTGCGATCTCGCTAACTTATACTTTTGCTCACGAATTTGATAACCCGATCTACCCGATTCTGCGCAAGCTGGATGCATCTGGTCAGGTAACTGCGGTTCGAATGTATGTACCTAAAGCAAGTGAGATGCGTATGTGGGCTGGCATCTTATCGTTTAACGACATTCCATCCACGCAGGTTAACGAGATGGAAACGGTTGAATTATCCGTATCCCTGAAAGGTGACTTTACTTTCGTATCTTCCACTCTAGCATCGCCTGGTGCTTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
529220393e9a1dceeb7da88b76b85b3a9e5b21248d81c4dbc0e75eabdd4515d4
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50