Protein

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Genbank accession
WYW00076.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MGLVSQSVKNLKGGISQQPDILRFPNQGAQQVNGWSSETQGLQKRPPTKFIKRLGAPGSWGAKPLVHLVNRDAVEQYYMVFTGGGVAVVDLNGNSYQVRGYDGYANCPDPRGDLRLITVADYTFVVNRRTVVQMGSELTHAGYRNPQTRALVACRGGQYGRTLTVEVLIDVTWVKLAEHALPSGIGESGQAAAEMVKMVDAQYILDILVAQVNTNGAPWKITAAAGPGYMLLHRDDGGSFQGIRTKDGYADQLINGFIYQVQSFNKLPAQAPEGFLVEITGEATRSGDNYWVRYDGLGRVWKETVKPGIIAGLNRNTMPRGLVRAADGQFDWKVLDWNNRASGDNETNPLPSFVDGTINDVFFFRNRLGFLSGENVIMSRSSRYFNFFPPSVASLSDDDPLDIAVSHNRISILKYAVPFSEQLLLWSDQAQFVLSSQGILSPKTVELNLTTEFDVQDTARPFGIGRGVYFSAPRAAYTSLKRYYAVQDVSDVKNAEDVSAHVPSYIENRVFNIHGSGTENYVTLLSDGAPGIVYLYKFLYMAEDIAQQSWSHWEFGTQVNVLGCASIGSYMYLLMDRPEGIVLERMEFTAFTKDFPVEPYRTYIDGKVTTVCSEFDEDLFLSYINLSSLYGGAPGSQESFWTIDTDGVGQQHSPPRGGWQGDPRITLQGDQRGKTYIVGRSYTFLYEFSKFLIKQTADDGTTATEDIGRLQLRRAWLNYESSGSFEINVNNNNGRNTDNDFVYVMAGGRLGAEVRLGELNLGTGQFKFPVTGNAQNQRVTIVSDTPNPLNVIGCGYEGNYIRRSSGI
Physico‐chemical
properties
protein length:807 AA
molecular weight: 89297,08940 Da
isoelectric point:5,52068
aromaticity:0,11152
hydropathy:-0,29542

Domains

Domains [InterPro]
IPR058003
TTP
1–807
IPR058003
WYW00076.1
1 807
Architecture
TTP
TTP 1-807
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYW00076.1
1 807
Domain Start End Length (AA) Confidence
N-terminal 1 145 145 0,9924
Central domain 146 357 213 0,0664
C-terminal 358 807 449 0,1128
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-145
Central
146-357
C-terminal
358-807

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuP-Hammaste-5
[NCBI] 		3132626 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW00076.1 [NCBI]
Genbank nucleotide accession
PP496422 [NCBI]
CDS location
range 25091 -> 27514
strand +
CDS
ATGGGTCTGGTTAGTCAGTCCGTAAAGAACCTGAAGGGTGGCATTAGCCAACAGCCGGACATCCTCCGGTTTCCCAATCAGGGTGCGCAACAAGTCAACGGCTGGTCGAGCGAGACCCAAGGTCTTCAGAAGCGACCGCCAACGAAGTTCATTAAGCGTCTCGGGGCACCGGGTTCGTGGGGCGCTAAGCCTCTCGTCCACTTGGTCAACCGTGATGCGGTCGAACAGTATTACATGGTGTTCACTGGTGGTGGCGTTGCCGTGGTGGACCTTAACGGGAACAGCTATCAGGTTCGTGGTTACGATGGCTATGCCAACTGCCCGGACCCGCGTGGAGACCTGCGACTGATCACTGTGGCCGACTACACGTTCGTTGTGAATCGACGCACCGTTGTCCAGATGGGCAGCGAGCTGACTCACGCCGGATACCGTAACCCACAGACCCGTGCCCTTGTGGCATGTCGCGGTGGTCAGTATGGCCGGACGTTGACCGTTGAGGTCCTTATCGACGTGACGTGGGTGAAGCTGGCCGAACATGCCCTGCCTTCGGGTATTGGCGAGAGCGGTCAAGCGGCTGCTGAAATGGTGAAGATGGTGGACGCTCAGTACATCCTCGACATCCTCGTGGCTCAAGTGAACACGAACGGTGCGCCATGGAAGATCACCGCTGCGGCAGGTCCGGGCTACATGCTCCTGCACCGTGACGATGGCGGTTCGTTCCAAGGCATCCGCACCAAGGATGGCTACGCTGACCAGTTGATCAATGGCTTCATCTATCAGGTCCAGTCGTTCAATAAGTTGCCCGCTCAGGCCCCTGAAGGTTTCCTTGTGGAGATCACCGGGGAAGCCACACGCTCAGGCGACAACTACTGGGTCCGTTATGATGGCCTTGGGCGAGTCTGGAAGGAGACCGTTAAGCCGGGGATCATCGCTGGCCTGAACCGTAACACCATGCCTCGTGGTCTGGTCCGTGCGGCTGACGGTCAGTTCGACTGGAAGGTACTCGACTGGAACAACCGTGCGAGCGGTGACAACGAGACCAACCCGCTGCCTTCCTTCGTGGACGGTACGATCAACGACGTGTTCTTCTTCCGTAACCGTTTGGGGTTCCTCTCAGGCGAGAACGTGATCATGAGCCGGTCGTCGCGGTACTTCAACTTCTTCCCACCAAGCGTGGCGAGCCTGTCCGATGATGACCCACTGGACATCGCGGTATCCCACAACCGTATCTCGATCCTCAAGTACGCCGTACCGTTCTCCGAACAGTTGCTGCTGTGGTCTGACCAAGCTCAGTTCGTGTTGTCCTCTCAGGGCATCCTGTCTCCCAAGACGGTCGAGCTTAACCTGACCACTGAGTTCGACGTACAGGACACCGCTCGGCCTTTCGGTATCGGGCGTGGTGTGTACTTCTCGGCCCCTCGTGCGGCCTATACGAGCCTCAAGCGTTACTACGCAGTGCAGGACGTATCGGACGTGAAGAACGCCGAGGACGTATCAGCGCATGTTCCAAGCTACATTGAGAACCGGGTGTTTAACATCCACGGCTCGGGTACTGAGAACTATGTGACCCTGCTGTCTGACGGCGCTCCGGGTATCGTGTACCTGTACAAGTTCCTCTACATGGCCGAAGACATTGCGCAACAGTCTTGGAGTCACTGGGAGTTCGGTACTCAGGTCAACGTGCTGGGCTGCGCTTCGATTGGCTCCTATATGTACCTCCTGATGGATCGCCCTGAAGGGATCGTACTGGAGCGCATGGAGTTCACGGCTTTCACCAAGGACTTCCCTGTGGAGCCTTACCGGACCTACATCGACGGCAAAGTGACAACCGTGTGCAGTGAGTTCGATGAAGACTTGTTCTTGTCGTACATCAACCTGTCCAGCCTGTATGGTGGCGCACCGGGTTCACAGGAATCCTTCTGGACTATCGACACGGATGGCGTAGGGCAACAGCACTCGCCTCCGAGAGGTGGCTGGCAGGGTGACCCACGGATCACTCTACAAGGTGACCAGCGGGGCAAGACGTACATCGTTGGCCGTTCCTACACGTTCCTCTATGAGTTCTCGAAGTTCCTGATCAAGCAAACCGCTGATGATGGGACAACAGCCACTGAGGACATTGGTCGGTTGCAGTTGCGCCGTGCGTGGTTGAACTACGAGTCTTCGGGTTCGTTCGAGATCAACGTGAACAACAACAATGGCCGCAACACGGACAACGACTTCGTGTACGTCATGGCTGGTGGCCGACTCGGTGCTGAGGTTCGCCTCGGTGAACTGAATCTCGGGACTGGTCAATTCAAGTTCCCGGTAACGGGTAACGCCCAGAACCAACGGGTGACCATCGTGAGCGACACACCGAACCCACTTAACGTGATCGGCTGTGGCTATGAGGGTAACTACATCCGTCGATCCAGCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
154c447e04f88856130997ab74fcab5a3ad0d71177756d8e2fa263ac0ac080be
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2866
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank