Protein

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Genbank accession
WDQ27663.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MALNGTKYTAFARHRLVLEWRANQNIAGNYSTISVWLYLQSMDKWGRLDAPAIGDAKVTVEGTTQTEKASSMLNAFQKKLLLAKEWRVNHNNDGSKRITIGGSYFVNVTFTDNGVSTYYGTITIPNFSVDLNRIPRRSSLNPVPTLNLPGNLPITINRQSSTFKHNLTAWVANRDNPTLNNDAHWTYLTNLNDVGTSGAFSFTVANNKTIFTALNNRTSWQGKVKLWTIGLDDVVSQERTYKIVPPMNAQASGGKITLNVGEKINVSLSNYRSDANFTYDGVFNISGLNIPIATNSAGNTMSYTLTQTDVDNILKKIPNSDSSWGQVTVTSKYSGVQYRTPWTGQRIDITIPKNKYVPSINGTPTYEDTSSVSVGLTGNNQVALQGKSNIKVTIPANFATANGHSTLKTIDVSLGGTSKTINYSNAETVVELGAPANHTSDTLIVTVTDSRGFKSNWTKHVDIYPYENPSMDFTVTRRNNFETTTDINVNSTWSPITIGGVNKNAIQSVTYATKVAGVGTYGAETALNFTANGSMVTVKNTPIELDNTNTYEVRLSVTDKFSTFTRTATVKPGNPIMFIDADNRSLFLGNAFVDNNNNELRGLLEIERDKWQEKGLVGISLNNSDISAVNGIWFSTDTSNNGGEGVHFIKSGKPRNSLKWEDYDYVYMRDNGFYVNNDSNPIFEVSDTGTMTFPTKQLWKGAAYLNDKQEVLPSKKLTECRNGWVLTFSAYESGAGQPWDITQVFIHKSVLDQFNTRGFRAIIGHGTTITFKYMYITDGRIGGNVNNGTGVNSGIVIREVSEW
Physico‐chemical
properties
protein length:803 AA
molecular weight: 88543,77300 Da
isoelectric point:8,92128
aromaticity:0,09838
hydropathy:-0,39452

Domains

Domains [InterPro]
DC_1676
ATT
4–140
DC_1676 DC_0631 IPR008577
IPR008577
STR
22–175
IPR008577 DC_1167
WDQ27663.1
1 803
Architecture
ATT
STR
STR
ATT 4-140 | STR 141-175 | STR 181-803
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDQ27663.1
1 803
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,0493
Central domain 141 387 248 0,7769
C-terminal 388 803 415 0,5545
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-387
C-terminal
388-803

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage 53
[NCBI] 		3028143 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterococcus sp.
[NCBI] 		35783 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDQ27663.1 [NCBI]
Genbank nucleotide accession
OQ420427 [NCBI]
CDS location
range 32506 -> 34917
strand +
CDS
ATGGCTTTAAACGGAACAAAGTATACAGCCTTTGCCCGACATAGATTAGTTTTAGAGTGGCGTGCAAATCAAAACATTGCAGGGAACTACTCAACAATCAGCGTATGGCTATACCTACAATCTATGGATAAATGGGGTAGACTTGATGCTCCCGCTATCGGTGATGCCAAAGTTACCGTAGAAGGGACTACACAGACAGAAAAAGCTTCCTCTATGTTAAATGCTTTCCAAAAGAAACTATTACTAGCTAAAGAGTGGAGAGTTAACCATAATAATGATGGTTCTAAAAGAATAACTATTGGGGGTAGTTACTTTGTAAACGTTACTTTTACTGATAACGGTGTATCAACATATTATGGTACGATAACTATACCTAATTTTTCAGTAGACCTAAATAGAATACCTAGAAGAAGTTCGTTAAACCCTGTCCCTACATTAAATTTACCGGGGAACTTACCAATAACAATAAATAGGCAGAGCTCCACATTCAAACATAATCTAACTGCTTGGGTAGCTAACAGAGATAACCCCACATTAAACAATGATGCCCATTGGACGTACTTGACAAACCTTAATGATGTGGGCACTAGTGGAGCGTTTAGTTTTACAGTAGCAAATAACAAAACTATTTTTACTGCATTAAACAATAGAACTAGTTGGCAAGGAAAGGTTAAACTCTGGACTATAGGGTTAGATGATGTAGTCAGTCAGGAAAGAACATACAAGATTGTTCCCCCAATGAATGCACAAGCATCGGGAGGTAAGATAACCTTAAATGTGGGAGAGAAAATCAATGTATCGCTAAGTAACTATCGGTCTGATGCAAACTTCACTTATGATGGGGTATTTAACATTAGTGGGCTTAACATACCTATTGCTACAAATTCAGCAGGGAATACAATGTCGTATACACTAACTCAAACAGATGTAGACAATATATTGAAGAAAATACCAAATTCGGATTCCTCGTGGGGTCAAGTAACTGTAACAAGTAAATATAGTGGAGTACAATACAGGACTCCATGGACAGGGCAGAGAATAGATATAACTATACCTAAAAACAAGTATGTACCAAGTATTAATGGTACCCCTACTTATGAAGACACAAGTAGTGTCTCTGTCGGGCTTACAGGTAACAATCAGGTAGCTCTTCAAGGTAAGTCTAATATCAAAGTAACCATCCCTGCTAACTTTGCAACGGCTAATGGTCACTCTACTTTGAAAACAATTGACGTGTCTTTAGGTGGTACATCAAAAACAATCAACTATTCAAATGCAGAAACAGTTGTAGAATTAGGGGCACCTGCTAACCACACATCAGATACACTAATAGTCACAGTAACTGACAGTCGTGGGTTTAAGTCTAACTGGACAAAACATGTAGACATTTATCCCTATGAAAATCCAAGTATGGACTTTACAGTCACACGTAGAAATAACTTTGAGACAACTACAGATATTAATGTCAATAGTACATGGTCTCCTATAACTATAGGTGGTGTAAACAAAAATGCTATCCAATCAGTAACCTACGCAACAAAAGTAGCAGGTGTTGGTACTTATGGAGCAGAAACGGCTTTAAATTTTACAGCTAATGGTAGTATGGTAACAGTAAAAAATACACCAATAGAATTAGATAATACCAATACATACGAAGTTAGGTTGAGCGTAACTGATAAGTTTAGTACGTTTACTAGAACAGCTACTGTTAAACCGGGTAACCCTATCATGTTTATTGATGCCGATAATCGAAGTCTGTTTTTAGGTAATGCCTTTGTTGACAATAACAATAATGAGCTAAGAGGCTTATTAGAGATAGAAAGAGATAAGTGGCAGGAGAAAGGTTTAGTAGGAATATCCTTAAACAACAGTGATATATCAGCAGTCAATGGCATATGGTTCTCGACAGATACATCAAATAACGGAGGTGAAGGAGTTCACTTTATTAAATCAGGTAAACCAAGAAACTCCTTAAAGTGGGAGGACTATGACTACGTTTATATGAGGGACAATGGATTCTATGTTAACAATGACTCTAACCCTATATTTGAAGTTTCTGACACTGGTACGATGACGTTTCCTACTAAACAGCTTTGGAAAGGGGCTGCCTATTTAAACGATAAACAAGAAGTTTTACCTAGTAAAAAACTGACGGAGTGTCGAAACGGATGGGTTTTGACCTTCTCCGCATATGAGTCAGGTGCAGGGCAACCTTGGGATATAACTCAGGTATTTATTCACAAGTCTGTACTAGACCAGTTTAACACAAGAGGGTTTAGGGCTATAATAGGTCATGGAACTACGATAACATTTAAATATATGTATATAACTGACGGTCGTATTGGAGGTAACGTTAACAATGGGACAGGAGTTAACAGTGGCATTGTCATAAGGGAGGTATCAGAATGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ba2db6254d0fa98ba8a81d75ffcbf7c2521a58898d0947d272d601f34fd018fb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3086
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage-specific immune responses impair efficacy of phage therapy targeting VRE in a murine model Berkson,J.D., Carlson,P.E. and Schubert,A.M. 2023 — GenBank